RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ZNF335Q9H4Z2 1342 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-201ENST00000349038 PRPF6O94906 941 aaKnown RBP17.03■□□□□ 0.32
PTBP1-201ENST00000349038 IPO7O95373 1038 aaKnown RBP17.03■□□□□ 0.32
PTBP1-201ENST00000349038 ELF1P32519 619 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 WHAMMP3Q1A5X7 153 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 PLIN2Q99541 437 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 AFDNP55196 1824 aaKnown RBP17.03■□□□□ 0.32
PTBP1-201ENST00000349038 A0A087WZG4 1122 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 CCDC196A0A1B0GTZ2 297 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
PTBP1-201ENST00000349038 USP14P54578 494 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 MAATS1Q7Z4T9 603 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 KRI1Q8N9T8 703 aaKnown RBP17.03■□□□□ 0.32
PTBP1-201ENST00000349038 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 DMGDHQ9UI17 866 aaKnown RBP17.03■□□□□ 0.32
PTBP1-201ENST00000349038 TMEM94Q12767 1356 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 B4E1Z4 1266 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 CCDC181Q5TID7 509 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 CCDC70Q6NSX1 233 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 SYNRGQ9UMZ2 1314 aa17.03■□□□□ 0.32
PTBP1-201ENST00000349038 ZNF213O14771 459 aa17.02■□□□□ 0.32
PTBP1-201ENST00000349038 UPP2O95045 317 aa17.02■□□□□ 0.32
PTBP1-201ENST00000349038 ODF2Q5BJF6 829 aa17.02■□□□□ 0.32
PTBP1-201ENST00000349038 RRAGBQ5VZM2 374 aa17.02■□□□□ 0.32
PTBP1-201ENST00000349038 OSBP2Q969R2 916 aa17.02■□□□□ 0.32
PTBP1-201ENST00000349038 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.32
PTBP1-201ENST00000349038 RNF113AO15541 343 aaKnown RBP17.02■□□□□ 0.31
PTBP1-201ENST00000349038 FGAP02671 866 aa17.02■□□□□ 0.31
PTBP1-201ENST00000349038 CD44P16070 742 aaKnown RBP17.02■□□□□ 0.31
PTBP1-201ENST00000349038 NEDD9Q14511 834 aa17.02■□□□□ 0.31
PTBP1-201ENST00000349038 NR1I3Q14994 352 aa17.02■□□□□ 0.31
PTBP1-201ENST00000349038 SWT1Q5T5J6 900 aaKnown RBP17.02■□□□□ 0.31
PTBP1-201ENST00000349038 ZKSCAN4Q969J2 545 aaPredicted RBP17.02■□□□□ 0.31
PTBP1-201ENST00000349038 CABP5Q9NP86 173 aa17.02■□□□□ 0.31
PTBP1-201ENST00000349038 TTF2Q9UNY4 1162 aaKnown RBP17.02■□□□□ 0.31
PTBP1-201ENST00000349038 HPS5Q9UPZ3 1129 aa17.02■□□□□ 0.31
PTBP1-201ENST00000349038 AGPSO00116 658 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 RPS6KA5O75582 802 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 PPFIA1Q13136 1202 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-201ENST00000349038 LRRC1Q9BTT6 524 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 BAIAP2L1Q9UHR4 511 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 DACH1Q9UI36 760 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 AXIN2Q9Y2T1 843 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 PCDHB6Q9Y5E3 794 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 XIRP1Q702N8 1843 aaKnown RBP17.01■□□□□ 0.31
PTBP1-201ENST00000349038 EIF3HO15372 352 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTBP1-201ENST00000349038 FOXO4P98177 505 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 IQCA1Q86XH1 822 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 EPN1Q9Y6I3 576 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-201ENST00000349038 SCN11AQ9UI33 1791 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 ARFGEF2Q9Y6D5 1785 aa17.01■□□□□ 0.31
PTBP1-201ENST00000349038 PDE2AO00408 941 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-201ENST00000349038 GSCP56915 257 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-201ENST00000349038 SAFBQ15424 915 aaKnown RBP eCLIP17■□□□□ 0.31
PTBP1-201ENST00000349038 CNGA4Q8IV77 575 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 NKX2-3Q8TAU0 364 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 ZSCAN5CA6NGD5 496 aaPredicted RBP17■□□□□ 0.31
PTBP1-201ENST00000349038 GOLGA8AA7E2F4 631 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 FOXP2O15409 715 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 HSF2BPO75031 334 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 GUCY1A2P33402 732 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 GCKP35557 465 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 CCDC96Q2M329 555 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 KLC4Q9NSK0 619 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 VPS54Q9P1Q0 977 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 SPEF2Q9C093 1822 aa17■□□□□ 0.31
PTBP1-201ENST00000349038 FAM205CA6NFA0 338 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 NNTQ13423 1086 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 CCDC40Q4G0X9 1142 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 KRT26Q7Z3Y9 468 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 DIS3L2Q8IYB7 885 aaKnown RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 ENO4A6NNW6 628 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 OPLAHO14841 1288 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 FAM43BQ6ZT52 329 aaPredicted RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 MLKLQ8NB16 471 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 THOC1Q96FV9 657 aaKnown RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 TACO1Q9BSH4 297 aaKnown RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 CSRNP2Q9H175 543 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 HPSEQ9Y251 543 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 SNRPA1P09661 255 aaKnown RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 RASGRP2Q7LDG7 609 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 MB21D2Q8IYB1 491 aaPredicted RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 TSEN2Q8NCE0 465 aaKnown RBP16.99■□□□□ 0.31
PTBP1-201ENST00000349038 ABHD10Q9NUJ1 306 aa16.99■□□□□ 0.31
PTBP1-201ENST00000349038 RESP18Q5W5W9 173 aa16.98■□□□□ 0.31
PTBP1-201ENST00000349038 NCOA7Q8NI08 942 aa16.98■□□□□ 0.31
PTBP1-201ENST00000349038 ENOX1Q8TC92 643 aaKnown RBP16.98■□□□□ 0.31
PTBP1-201ENST00000349038 CCDC43Q96MW1 224 aaKnown RBP16.98■□□□□ 0.31
PTBP1-201ENST00000349038 PANX2Q96RD6 677 aa16.98■□□□□ 0.31
PTBP1-201ENST00000349038 HAUS2Q9NVX0 235 aa16.98■□□□□ 0.31
PTBP1-201ENST00000349038 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
PTBP1-201ENST00000349038 GPTP24298 496 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms