RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 NKX2-3Q8TAU0 364 aa15.92■□□□□ 0.14
CLCC1-202ENST00000348264 SOCS4Q8WXH5 440 aa15.92■□□□□ 0.14
CLCC1-202ENST00000348264 TRIB2Q92519 343 aa15.92■□□□□ 0.14
CLCC1-202ENST00000348264 TANGO6Q9C0B7 1094 aa15.92■□□□□ 0.14
CLCC1-202ENST00000348264 ARHGEF10LQ9HCE6 1279 aa15.92■□□□□ 0.14
CLCC1-202ENST00000348264 BTBD7Q9P203 1132 aa15.92■□□□□ 0.14
CLCC1-202ENST00000348264 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
CLCC1-202ENST00000348264 TMX2Q9Y320 296 aa15.92■□□□□ 0.14
CLCC1-202ENST00000348264 MINDY4BA8MYZ0 360 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 GNAT2P19087 354 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 CYP2B6P20813 491 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 RASA1P20936 1047 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 TDO2P48775 406 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 PDE1AP54750 535 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 MORN1Q5T089 497 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 PLEKHH3Q7Z736 793 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 EXOC6Q8TAG9 804 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 USP6NLQ92738 828 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 NUDT12Q9BQG2 462 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.91■□□□□ 0.14
CLCC1-202ENST00000348264 SH2D4AQ9H788 454 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 VCPKMTQ9H867 229 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 PAK6Q9NQU5 681 aaPredicted RBP15.91■□□□□ 0.14
CLCC1-202ENST00000348264 STAP2Q9UGK3 403 aa15.91■□□□□ 0.14
CLCC1-202ENST00000348264 EEF2P13639 858 aaKnown RBP15.9■□□□□ 0.14
CLCC1-202ENST00000348264 ATP2B2Q01814 1243 aa15.9■□□□□ 0.14
CLCC1-202ENST00000348264 AAMPQ13685 434 aa15.9■□□□□ 0.14
CLCC1-202ENST00000348264 UBE2Q1Q7Z7E8 422 aa15.9■□□□□ 0.14
CLCC1-202ENST00000348264 CCAR1Q8IX12 1150 aaKnown RBP15.9■□□□□ 0.14
CLCC1-202ENST00000348264 LPAR1Q92633 364 aa15.9■□□□□ 0.14
CLCC1-202ENST00000348264 DEFB118Q96PH6 123 aa15.9■□□□□ 0.14
CLCC1-202ENST00000348264 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLCC1-202ENST00000348264 KANSL2Q9H9L4 492 aa15.9■□□□□ 0.14
CLCC1-202ENST00000348264 ZNF236Q9UL36 1845 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 FOXP2O15409 715 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 SGPL1O95470 568 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 APPP05067 770 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
CLCC1-202ENST00000348264 CCNA1P78396 465 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 COG2Q14746 738 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 CCDC129Q6ZRS4 1044 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 SMC5Q8IY18 1101 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 IFNL3Q8IZI9 196 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 APBA2Q99767 749 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 LNPKQ9C0E8 428 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 ALPK3Q96L96 1907 aa15.89■□□□□ 0.13
CLCC1-202ENST00000348264 PATL2C9JE40 543 aaKnown RBP15.88■□□□□ 0.13
CLCC1-202ENST00000348264 WDR46O15213 610 aaKnown RBP15.88■□□□□ 0.13
CLCC1-202ENST00000348264 PRDM1O75626 825 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 FLOT1O75955 427 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 FARP2O94887 1054 aaPredicted RBP15.88■□□□□ 0.13
CLCC1-202ENST00000348264 RGS2P41220 211 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 CCL14Q16627 93 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 MAP3K21Q5TCX8 1036 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 WDR78Q5VTH9 848 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 ATG4CQ96DT6 458 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 MKNK2Q9HBH9 465 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 CWC22Q9HCG8 908 aaKnown RBP15.88■□□□□ 0.13
CLCC1-202ENST00000348264 FRMPD3Q5JV73 1810 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 TRIOBPQ9H2D6 2365 aa15.88■□□□□ 0.13
CLCC1-202ENST00000348264 IGHDP01880 384 aa15.87■□□□□ 0.13
CLCC1-202ENST00000348264 PRKAR2AP13861 404 aaKnown RBP15.87■□□□□ 0.13
CLCC1-202ENST00000348264 ZKSCAN1P17029 563 aaPredicted RBP15.87■□□□□ 0.13
CLCC1-202ENST00000348264 DSG3P32926 999 aa15.87■□□□□ 0.13
CLCC1-202ENST00000348264 MAP2K5Q13163 448 aa15.87■□□□□ 0.13
CLCC1-202ENST00000348264 EVI5LQ96CN4 794 aa15.87■□□□□ 0.13
CLCC1-202ENST00000348264 MOV10L1Q9BXT6 1211 aaKnown RBP15.87■□□□□ 0.13
CLCC1-202ENST00000348264 NACAP1Q9BZK3 213 aa15.87■□□□□ 0.13
CLCC1-202ENST00000348264 CRISPLD2Q9H0B8 497 aa15.87■□□□□ 0.13
CLCC1-202ENST00000348264 RWDD1Q9H446 243 aaPredicted RBP15.87■□□□□ 0.13
CLCC1-202ENST00000348264 HOXC10Q9NYD6 342 aa15.87■□□□□ 0.13
CLCC1-202ENST00000348264 ZNFX1Q9P2E3 1918 aaKnown RBP15.87■□□□□ 0.13
CLCC1-202ENST00000348264 RPTORQ8N122 1335 aa15.87■□□□□ 0.13
CLCC1-202ENST00000348264 RANBP2P49792 3224 aaKnown RBP15.87■□□□□ 0.13
CLCC1-202ENST00000348264 IGKV6D-41A0A0C4DH26 115 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 SLC15A5A6NIM6 579 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 PTPREP23469 700 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 GRB14Q14449 540 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 B4GALNT3Q6L9W6 998 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
CLCC1-202ENST00000348264 SPATC1LQ9H0A9 340 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 NAPBQ9H115 298 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 GOPCQ9HD26 462 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 FBXO28Q9NVF7 368 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 PLIN4Q96Q06 1357 aa15.86■□□□□ 0.13
CLCC1-202ENST00000348264 A0A0D9SFI3 127 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 RAD21O60216 631 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 TFRCP02786 760 aaKnown RBP15.85■□□□□ 0.13
CLCC1-202ENST00000348264 PPARAQ07869 468 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 FAM83BQ5T0W9 1011 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 VPS53Q5VIR6 699 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 TRMT44Q8IYL2 757 aaKnown RBP15.85■□□□□ 0.13
CLCC1-202ENST00000348264 MB21D1Q8N884 522 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 HMX1Q9NP08 348 aaPredicted RBP15.85■□□□□ 0.13
CLCC1-202ENST00000348264 FLRT1Q9NZU1 646 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 NYAP2Q9P242 653 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
CLCC1-202ENST00000348264 IVNS1ABPQ9Y6Y0 642 aa15.85■□□□□ 0.13
CLCC1-202ENST00000348264 ERCC3P19447 782 aa15.84■□□□□ 0.13
CLCC1-202ENST00000348264 NUCB1Q02818 461 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms