RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 GH2P01242 217 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 VCAM1P19320 739 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 GUCY1A2P33402 732 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 RTP1P59025 263 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L24Q0WX57 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 SHHQ15465 462 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 C9orf50Q5SZB4 431 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 C1orf53Q5VUE5 145 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 KIF1BPQ96EK5 621 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 SEMA6BQ9H3T3 888 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 LRP2BPQ9P2M1 347 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 EXOC6BQ9Y2D4 811 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 COL11A1P12107 1806 aaPredicted RBP11.71□□□□□ -0.54
MRPL55-204ENST00000348259 TRANK1O15050 2925 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 NCOR1O75376 2440 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 SURF6O75683 361 aaKnown RBP11.7□□□□□ -0.54
MRPL55-204ENST00000348259 CYP2C19P33261 490 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
MRPL55-204ENST00000348259 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 MFSD14CQ5VZR4 134 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 ACER1Q8TDN7 264 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 FAM161BQ96MY7 647 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 DBNDD2Q9BQY9 259 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
MRPL55-204ENST00000348259 PDLIM7Q9NR12 457 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 SNRKQ9NRH2 765 aa11.7□□□□□ -0.54
MRPL55-204ENST00000348259 MYH8P13535 1937 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 SHMT1P34896 483 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-204ENST00000348259 CCNA1P78396 465 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 SMAD3P84022 425 aaKnown RBP11.69□□□□□ -0.54
MRPL55-204ENST00000348259 GABPAQ06546 454 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 TTC22Q5TAA0 569 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 SLC39A5Q6ZMH5 540 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 RHPN1Q8TCX5 695 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 LBHD1Q9BQE6 289 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-204ENST00000348259 SAP30BPQ9UHR5 308 aaKnown RBP11.69□□□□□ -0.54
MRPL55-204ENST00000348259 NDUFB9Q9Y6M9 179 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
MRPL55-204ENST00000348259 ROBO3Q96MS0 1386 aa11.68□□□□□ -0.54
MRPL55-204ENST00000348259 TRIM43BA6NCK2 446 aa11.68□□□□□ -0.54
MRPL55-204ENST00000348259 GLRX3O76003 335 aaKnown RBP11.68□□□□□ -0.54
MRPL55-204ENST00000348259 ITGB8P26012 769 aa11.68□□□□□ -0.54
MRPL55-204ENST00000348259 ZAP70P43403 619 aa11.68□□□□□ -0.54
MRPL55-204ENST00000348259 PDE1AP54750 535 aa11.68□□□□□ -0.54
MRPL55-204ENST00000348259 GORABQ5T7V8 394 aa11.68□□□□□ -0.54
MRPL55-204ENST00000348259 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
MRPL55-204ENST00000348259 CRACR2BQ8N4Y2 399 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-204ENST00000348259 MAFAQ8NHW3 353 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-204ENST00000348259 TRIM43Q96BQ3 446 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-204ENST00000348259 PRDM6Q9NQX0 595 aa11.68□□□□□ -0.54
MRPL55-204ENST00000348259 TMEM265A0A087WTH1 108 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 A0A1W2PRG0 241 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 SEPT4O43236 478 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
MRPL55-204ENST00000348259 COBLO75128 1261 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 HLA-DOAP06340 250 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 USP14P54578 494 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
MRPL55-204ENST00000348259 SHCBP1Q8NEM2 672 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 NOL10Q9BSC4 688 aaKnown RBP11.67□□□□□ -0.54
MRPL55-204ENST00000348259 MOV10L1Q9BXT6 1211 aaKnown RBP11.67□□□□□ -0.54
MRPL55-204ENST00000348259 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 DBNLQ9UJU6 430 aaKnown RBP11.67□□□□□ -0.54
MRPL55-204ENST00000348259 XIRP2A4UGR9 3374 aa11.67□□□□□ -0.54
MRPL55-204ENST00000348259 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-204ENST00000348259 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
MRPL55-204ENST00000348259 MX1P20591 662 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 ADORA2AP29274 412 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
MRPL55-204ENST00000348259 EPHB4P54760 987 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 ATP2B2Q01814 1243 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 EVX2Q03828 476 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 G3BP1Q13283 466 aaKnown RBP eCLIP11.66□□□□□ -0.54
MRPL55-204ENST00000348259 LRRC41Q15345 812 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 ZYXQ15942 572 aaKnown RBP11.66□□□□□ -0.54
MRPL55-204ENST00000348259 TRIM60Q495X7 471 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 CERS3Q8IU89 383 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 ARRDC4Q8NCT1 418 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 MYLIPQ8WY64 445 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 BADQ92934 168 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 RIOK1Q9BRS2 568 aaKnown RBP11.66□□□□□ -0.54
MRPL55-204ENST00000348259 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-204ENST00000348259 TLR7Q9NYK1 1049 aaKnown RBP11.66□□□□□ -0.54
MRPL55-204ENST00000348259 ATP11BQ9Y2G3 1177 aa11.66□□□□□ -0.54
MRPL55-204ENST00000348259 TTC41PQ6P2S7 1318 aa11.65□□□□□ -0.54
MRPL55-204ENST00000348259 APBB1O00213 710 aa11.65□□□□□ -0.54
MRPL55-204ENST00000348259 STRNO43815 780 aa11.65□□□□□ -0.54
MRPL55-204ENST00000348259 CYP7A1P22680 504 aa11.65□□□□□ -0.54
MRPL55-204ENST00000348259 PLCD1P51178 756 aa11.65□□□□□ -0.54
MRPL55-204ENST00000348259 ABCB5Q2M3G0 1257 aa11.65□□□□□ -0.54
MRPL55-204ENST00000348259 CERKLQ49MI3 558 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-204ENST00000348259 TTC39AQ5SRH9 613 aa11.65□□□□□ -0.54
MRPL55-204ENST00000348259 TMED8Q6PL24 325 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-204ENST00000348259 CCAR1Q8IX12 1150 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms