RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 CTNND2Q9UQB3 1225 aa15.11■□□□□ 0.01
SNX21-202ENST00000344780 SLIT2O94813 1529 aa15.11■□□□□ 0.01
SNX21-202ENST00000344780 XIRP1Q702N8 1843 aaKnown RBP15.1■□□□□ 0.01
SNX21-202ENST00000344780 AKR1B15C9JRZ8 316 aaPredicted RBP15.1■□□□□ 0.01
SNX21-202ENST00000344780 ADAMTS3O15072 1205 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 ACTN4O43707 911 aaKnown RBP15.1■□□□□ 0.01
SNX21-202ENST00000344780 PTGDRQ13258 359 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 MORC3Q14149 939 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 ZSCAN26Q16670 478 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 BANK1Q8NDB2 785 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 RASGRP4Q8TDF6 673 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 BRMS1Q9HCU9 246 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 TAF1P21675 1872 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 GNPATO15228 680 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 TFRCP02786 760 aaKnown RBP15.1■□□□□ 0.01
SNX21-202ENST00000344780 BRD2P25440 801 aaKnown RBP15.1■□□□□ 0.01
SNX21-202ENST00000344780 RRAGBQ5VZM2 374 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 NGLY1Q96IV0 654 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 ZSCAN10Q96SZ4 725 aaPredicted RBP15.1■□□□□ 0.01
SNX21-202ENST00000344780 CPVLQ9H3G5 476 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 MRPL44Q9H9J2 332 aaKnown RBP15.1■□□□□ 0.01
SNX21-202ENST00000344780 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.1■□□□□ 0.01
SNX21-202ENST00000344780 PHLPP2Q6ZVD8 1323 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 MYH7P12883 1935 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 N4BP3O15049 544 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 FILIP1LQ4L180 1135 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 PARP10Q53GL7 1025 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 KANK3Q6NY19 840 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 TMEM139Q8IV31 216 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 ZNF384Q8TF68 577 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 DYNLL2Q96FJ2 89 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 STK36Q9NRP7 1315 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 SYNRGQ9UMZ2 1314 aa15.1■□□□□ 0.01
SNX21-202ENST00000344780 STX10O60499 249 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 H2AFXP16104 143 aaPredicted RBP15.09■□□□□ 0.01
SNX21-202ENST00000344780 CASP14P31944 242 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 PLCD1P51178 756 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 ZNF569Q5MCW4 686 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 FOXR1Q6PIV2 292 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 PAGE5Q96GU1 130 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 KCND1Q9NSA2 647 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 UBR2Q8IWV8 1755 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 SPEF2Q9C093 1822 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 USP17L8P0C7I0 530 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 KIF4BQ2VIQ3 1234 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 CT47A1Q5JQC4 288 aaPredicted RBP15.09■□□□□ 0.01
SNX21-202ENST00000344780 AMIGO3Q86WK7 504 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 RABEP2Q9H5N1 569 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
SNX21-202ENST00000344780 ZNF652Q9Y2D9 606 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 FHOD1Q9Y613 1164 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 SPATA31A1Q5TZJ5 1347 aa15.09■□□□□ 0.01
SNX21-202ENST00000344780 TADA3O75528 432 aa15.08■□□□□ 0.01
SNX21-202ENST00000344780 CCDC175P0C221 793 aa15.08■□□□□ 0.01
SNX21-202ENST00000344780 PDE6BP35913 854 aa15.08■□□□□ 0.01
SNX21-202ENST00000344780 MECOMQ03112 1051 aa15.08■□□□□ 0.01
SNX21-202ENST00000344780 TTC38Q5R3I4 469 aa15.08■□□□□ 0.01
SNX21-202ENST00000344780 CTCFLQ8NI51 663 aaPredicted RBP15.08■□□□□ 0.01
SNX21-202ENST00000344780 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0.01
SNX21-202ENST00000344780 NUP88Q99567 741 aaPredicted RBP15.08■□□□□ 0.01
SNX21-202ENST00000344780 MCM9Q9NXL9 1143 aa15.08■□□□□ 0.01
SNX21-202ENST00000344780 ANKIB1Q9P2G1 1089 aa15.08■□□□□ 0.01
SNX21-202ENST00000344780 SAP30BPQ9UHR5 308 aaKnown RBP15.08■□□□□ 0.01
SNX21-202ENST00000344780 TSPY2A6NKD2 308 aa15.08■□□□□ 0
SNX21-202ENST00000344780 PLA2G4AP47712 749 aa15.08■□□□□ 0
SNX21-202ENST00000344780 DIXDC1Q155Q3 683 aa15.08■□□□□ 0
SNX21-202ENST00000344780 RASGRP2Q7LDG7 609 aa15.08■□□□□ 0
SNX21-202ENST00000344780 FAM237AA0A1B0GTK4 181 aa15.08■□□□□ 0
SNX21-202ENST00000344780 ZNF18P17022 549 aa15.08■□□□□ 0
SNX21-202ENST00000344780 SETDB2Q96T68 719 aa15.08■□□□□ 0
SNX21-202ENST00000344780 TAB2Q9NYJ8 693 aa15.08■□□□□ 0
SNX21-202ENST00000344780 EFCAB8A8MWE9 144 aa15.07■□□□□ 0
SNX21-202ENST00000344780 PHACTR2O75167 634 aa15.07■□□□□ 0
SNX21-202ENST00000344780 NOP2P46087 812 aaKnown RBP15.07■□□□□ 0
SNX21-202ENST00000344780 KCNJ6P48051 423 aa15.07■□□□□ 0
SNX21-202ENST00000344780 RPS8P62241 208 aaKnown RBP15.07■□□□□ 0
SNX21-202ENST00000344780 CTR9Q6PD62 1173 aa15.07■□□□□ 0
SNX21-202ENST00000344780 RAD9BQ6WBX8 426 aa15.07■□□□□ 0
SNX21-202ENST00000344780 ACRBPQ8NEB7 543 aa15.07■□□□□ 0
SNX21-202ENST00000344780 TPM1P09493 284 aa15.07■□□□□ 0
SNX21-202ENST00000344780 OAS2P29728 719 aaKnown RBP15.07■□□□□ 0
SNX21-202ENST00000344780 SARSP49591 514 aaKnown RBP15.07■□□□□ 0
SNX21-202ENST00000344780 PKN1Q16512 942 aa15.07■□□□□ 0
SNX21-202ENST00000344780 SLC44A5Q8NCS7 719 aa15.07■□□□□ 0
SNX21-202ENST00000344780 RNF26Q9BY78 433 aaPredicted RBP15.07■□□□□ 0
SNX21-202ENST00000344780 ITGB4P16144 1822 aa15.07■□□□□ 0
SNX21-202ENST00000344780 NUP98P52948 1817 aa15.07■□□□□ 0
SNX21-202ENST00000344780 SHANK3Q9BYB0 1731 aa15.07■□□□□ 0
SNX21-202ENST00000344780 ZPR1O75312 459 aa15.06■□□□□ 0
SNX21-202ENST00000344780 MCM6Q14566 821 aa15.06■□□□□ 0
SNX21-202ENST00000344780 NR1I3Q14994 352 aa15.06■□□□□ 0
SNX21-202ENST00000344780 SPATA1Q5VX52 437 aa15.06■□□□□ 0
SNX21-202ENST00000344780 NLRP3Q96P20 1036 aa15.06■□□□□ 0
SNX21-202ENST00000344780 RIOK1Q9BRS2 568 aaKnown RBP15.06■□□□□ 0
SNX21-202ENST00000344780 COL4A1P02462 1669 aa15.06■□□□□ 0
SNX21-202ENST00000344780 KIF5CO60282 957 aa15.06■□□□□ 0
SNX21-202ENST00000344780 RHOXF2BP0C7M4 288 aa15.06■□□□□ 0
SNX21-202ENST00000344780 GOLGA8HP0CJ92 632 aa15.06■□□□□ 0
SNX21-202ENST00000344780 RHOXF2Q9BQY4 288 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms