RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ELOA2Q8IYF1 753 aaPredicted RBP16.98■□□□□ 0.31
VIPAS39-202ENST00000343765 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
VIPAS39-202ENST00000343765 DACH1Q9UI36 760 aa16.98■□□□□ 0.31
VIPAS39-202ENST00000343765 BTAF1O14981 1849 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 SBK1Q52WX2 424 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 TRAPPC3LQ5T215 181 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 KIF18AQ8NI77 898 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 ANKRD7Q92527 254 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 MED15Q96RN5 788 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 MKNK2Q9HBH9 465 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 SYT10Q6XYQ8 523 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 STAG2Q8N3U4 1231 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 RASGRP4Q8TDF6 673 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 PAGE5Q96GU1 130 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 IL17RBQ9NRM6 502 aa16.97■□□□□ 0.31
VIPAS39-202ENST00000343765 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 UTRNP46939 3433 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 RGL2O15211 777 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 GRAPQ13588 217 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 HOMER1Q86YM7 354 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 PNMA1Q8ND90 353 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 ZNF215Q9UL58 517 aaPredicted RBP16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 TNRC6CQ9HCJ0 1690 aaKnown RBP16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 COBLO75128 1261 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 SLFN14P0C7P3 912 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 PFKFB3Q16875 520 aaPredicted RBP16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 C12orf60Q5U649 245 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 MAPKAPK5Q8IW41 473 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 FERMT2Q96AC1 680 aa16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 CCDC94Q9BW85 323 aaPredicted RBP16.96■□□□□ 0.31
VIPAS39-202ENST00000343765 ZNF831Q5JPB2 1677 aa16.96■□□□□ 0.3
VIPAS39-202ENST00000343765 KIF5BP33176 963 aa16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 ENOX1Q8TC92 643 aaKnown RBP16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 PLCD1P51178 756 aa16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 TRIML1Q8N9V2 468 aa16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 BLZF1Q9H2G9 400 aa16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 KCND1Q9NSA2 647 aa16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
VIPAS39-202ENST00000343765 BMP15O95972 392 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 TSPY3P0CV98 308 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 TSPY8P0CW00 308 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 ZNF18P17022 549 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 CDC25AP30304 524 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 ATP2C1P98194 919 aaPredicted RBP16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 COL24A1Q17RW2 1714 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 ADKP55263 362 aaKnown RBP16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 RASGRP2Q7LDG7 609 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 SPATA20Q8TB22 786 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 NOL10Q9BSC4 688 aaKnown RBP16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 FAM205AQ6ZU69 1335 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 ZNF804AQ7Z570 1209 aa16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 MKRN1Q9UHC7 482 aaKnown RBP16.94■□□□□ 0.3
VIPAS39-202ENST00000343765 XDHP47989 1333 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 SPDYE4A6NLX3 237 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 MYO1BO43795 1136 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 UFL1O94874 794 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 GPSM2P81274 684 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 DHX8Q14562 1220 aaKnown RBP16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 IL17AQ16552 155 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 LEMD3Q9Y2U8 911 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 LAMB1P07942 1786 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 SYNRGQ9UMZ2 1314 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 BAG3O95817 575 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 GOLGA8HP0CJ92 632 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 AMOTL1Q8IY63 956 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 ZNF444Q8N0Y2 327 aaPredicted RBP16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 FAM177A1Q8N128 213 aaPredicted RBP16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
VIPAS39-202ENST00000343765 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 CBX1P83916 185 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 DPYDQ12882 1025 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 TYW1BQ6NUM6 668 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 HEATR3Q7Z4Q2 680 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 BLIDQ8IZY5 108 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 LRRC4BQ9NT99 713 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 KIF2AO00139 706 aaPredicted RBP16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 SPECC1LQ69YQ0 1117 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 SH3RF1Q7Z6J0 888 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 CCDC88AQ3V6T2 1871 aa16.92■□□□□ 0.3
VIPAS39-202ENST00000343765 DGKHQ86XP1 1220 aa16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 TMX1Q9H3N1 280 aa16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 DNAI1Q9UI46 699 aa16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 ERCC5P28715 1186 aaPredicted RBP16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 BTDP43251 543 aa16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 KCNJ6P48051 423 aa16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 GSTO1P78417 241 aa16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 MAD2L2Q9UI95 211 aa16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 CTNND2Q9UQB3 1225 aa16.91■□□□□ 0.3
VIPAS39-202ENST00000343765 TEX33O43247 280 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms