RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CLIC6Q96NY7 704 aa21.38■■□□□ 1.01
HOXA9-201ENST00000343483 TMEM47Q9BQJ4 181 aa21.38■■□□□ 1.01
HOXA9-201ENST00000343483 BRMS1Q9HCU9 246 aa21.38■■□□□ 1.01
HOXA9-201ENST00000343483 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.38■■□□□ 1.01
HOXA9-201ENST00000343483 ZNF202O95125 648 aa21.37■■□□□ 1.01
HOXA9-201ENST00000343483 SCG2P13521 617 aa21.37■■□□□ 1.01
HOXA9-201ENST00000343483 SHC4Q6S5L8 630 aa21.37■■□□□ 1.01
HOXA9-201ENST00000343483 STAG2Q8N3U4 1231 aa21.37■■□□□ 1.01
HOXA9-201ENST00000343483 DDX4Q9NQI0 724 aaKnown RBP21.37■■□□□ 1.01
HOXA9-201ENST00000343483 ZNF165P49910 485 aa21.36■■□□□ 1.01
HOXA9-201ENST00000343483 GRM4Q14833 912 aa21.36■■□□□ 1.01
HOXA9-201ENST00000343483 TTC12Q9H892 705 aaPredicted RBP21.36■■□□□ 1.01
HOXA9-201ENST00000343483 PCDHB6Q9Y5E3 794 aa21.36■■□□□ 1.01
HOXA9-201ENST00000343483 ECE2O60344 883 aa21.36■■□□□ 1.01
HOXA9-201ENST00000343483 CAVIN2O95810 425 aa21.36■■□□□ 1.01
HOXA9-201ENST00000343483 STX1AQ16623 288 aa21.36■■□□□ 1.01
HOXA9-201ENST00000343483 PFKFB3Q16875 520 aaPredicted RBP21.36■■□□□ 1.01
HOXA9-201ENST00000343483 KRI1Q8N9T8 703 aaKnown RBP21.36■■□□□ 1.01
HOXA9-201ENST00000343483 NEDD1Q8NHV4 660 aa21.36■■□□□ 1.01
HOXA9-201ENST00000343483 MAD2L2Q9UI95 211 aa21.36■■□□□ 1.01
HOXA9-201ENST00000343483 FAM205CA6NFA0 338 aa21.35■■□□□ 1.01
HOXA9-201ENST00000343483 CUTAO60888 179 aa21.35■■□□□ 1.01
HOXA9-201ENST00000343483 HHIPL2Q6UWX4 724 aa21.35■■□□□ 1.01
HOXA9-201ENST00000343483 KIAA0825Q8IV33 1275 aa21.35■■□□□ 1.01
HOXA9-201ENST00000343483 SLX4Q8IY92 1834 aa21.35■■□□□ 1.01
HOXA9-201ENST00000343483 SYKP43405 635 aa21.35■■□□□ 1.01
HOXA9-201ENST00000343483 CDC42EP5Q6NZY7 148 aa21.35■■□□□ 1.01
HOXA9-201ENST00000343483 MYH6P13533 1939 aa21.35■■□□□ 1.01
HOXA9-201ENST00000343483 C10orf71Q711Q0 1435 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
HOXA9-201ENST00000343483 CRKP46108 304 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 GNAQP50148 359 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 NLRP5P59047 1200 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 AOC3Q16853 763 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 EARS2Q5JPH6 523 aaKnown RBP21.34■■□□□ 1.01
HOXA9-201ENST00000343483 RESP18Q5W5W9 173 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 APOBEC3HQ6NTF7 200 aaKnown RBP21.34■■□□□ 1.01
HOXA9-201ENST00000343483 SPC24Q8NBT2 197 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 CEP95Q96GE4 821 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 CEP131Q9UPN4 1083 aa21.34■■□□□ 1.01
HOXA9-201ENST00000343483 A0A087WWV3 80 aa21.33■■□□□ 1.01
HOXA9-201ENST00000343483 GOLGA6L6A8MZA4 724 aa21.33■■□□□ 1.01
HOXA9-201ENST00000343483 STRIP1Q5VSL9 837 aa21.33■■□□□ 1.01
HOXA9-201ENST00000343483 CD2APQ9Y5K6 639 aa21.33■■□□□ 1.01
HOXA9-201ENST00000343483 KIF13BQ9NQT8 1826 aa21.33■■□□□ 1.01
HOXA9-201ENST00000343483 TPM3P06753 285 aa21.33■■□□□ 1
HOXA9-201ENST00000343483 NPY5RQ15761 445 aa21.33■■□□□ 1
HOXA9-201ENST00000343483 C11orf57Q6ZUT1 292 aaPredicted RBP21.33■■□□□ 1
HOXA9-201ENST00000343483 C7orf43Q8WVR3 580 aa21.33■■□□□ 1
HOXA9-201ENST00000343483 HPSEQ9Y251 543 aa21.33■■□□□ 1
HOXA9-201ENST00000343483 TRIM75PA6NK02 468 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 GOLGA8HP0CJ92 632 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 SPECC1Q5M775 1068 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 DACT2Q5SW24 774 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 RASGRP2Q7LDG7 609 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 GPKOWQ92917 476 aaPredicted RBP eCLIP21.32■■□□□ 1
HOXA9-201ENST00000343483 R3HCC1Q9Y3T6 440 aaKnown RBP21.32■■□□□ 1
HOXA9-201ENST00000343483 MYH1P12882 1939 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 TPM2P07951 284 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 RBM5P52756 815 aaKnown RBP eCLIP21.32■■□□□ 1
HOXA9-201ENST00000343483 GABPAQ06546 454 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 ZRSR1Q15695 479 aaKnown RBP21.32■■□□□ 1
HOXA9-201ENST00000343483 OSBPL5Q9H0X9 879 aaPredicted RBP21.32■■□□□ 1
HOXA9-201ENST00000343483 ANO10Q9NW15 660 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 KIAA1468Q9P260 1216 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 SERPINB13Q9UIV8 391 aa21.32■■□□□ 1
HOXA9-201ENST00000343483 FBXO2Q9UK22 296 aaPredicted RBP21.32■■□□□ 1
HOXA9-201ENST00000343483 C21orf2O43822 256 aa21.31■■□□□ 1
HOXA9-201ENST00000343483 DPEP1P16444 411 aa21.31■■□□□ 1
HOXA9-201ENST00000343483 NFIAQ12857 509 aa21.31■■□□□ 1
HOXA9-201ENST00000343483 NOM1Q5C9Z4 860 aaKnown RBP21.31■■□□□ 1
HOXA9-201ENST00000343483 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
HOXA9-201ENST00000343483 TNFRSF25Q93038 417 aa21.31■■□□□ 1
HOXA9-201ENST00000343483 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
HOXA9-201ENST00000343483 PALM3A6NDB9 673 aaPredicted RBP21.3■■□□□ 1
HOXA9-201ENST00000343483 TOP1P11387 765 aaKnown RBP21.3■■□□□ 1
HOXA9-201ENST00000343483 PTPREP23469 700 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 GRIN1Q05586 938 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 TRIM5Q9C035 493 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 KCNH3Q9ULD8 1083 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 PCDHAC2Q9Y5I4 1007 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 FOCADQ5VW36 1801 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 FAM237AA0A1B0GTK4 181 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 KLRF2D3W0D1 207 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 SLC35G1Q2M3R5 365 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 TIGD1Q96MW7 591 aa21.3■■□□□ 1
HOXA9-201ENST00000343483 CYTH3O43739 400 aa21.29■■□□□ 1
HOXA9-201ENST00000343483 PARP1P09874 1014 aaKnown RBP21.29■■□□□ 1
HOXA9-201ENST00000343483 AKR1B1P15121 316 aa21.29■■□□□ 1
HOXA9-201ENST00000343483 KCNA3P22001 575 aa21.29■■□□□ 1
HOXA9-201ENST00000343483 ZNF75DP51815 510 aa21.29■■□□□ 1
HOXA9-201ENST00000343483 CACNB3P54284 484 aa21.29■■□□□ 1
HOXA9-201ENST00000343483 LZTS2Q9BRK4 669 aa21.29■■□□□ 1
HOXA9-201ENST00000343483 GOLGA6L19H0YKK7 550 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 HLA-DOAP06340 250 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 CALML3P27482 149 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 TERF1P54274 439 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 FKBP1AP62942 108 aaKnown RBP21.28■■□□□ 1
HOXA9-201ENST00000343483 IQCB1Q15051 598 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 CC2D2BQ6DHV5 1058 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms