RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 USP26Q9BXU7 913 aa22.09■■□□□ 1.13
CDHR4-201ENST00000343366 TOMM22Q9NS69 142 aa22.09■■□□□ 1.13
CDHR4-201ENST00000343366 ZBTB21Q9ULJ3 1066 aa22.09■■□□□ 1.13
CDHR4-201ENST00000343366 UNC80Q8N2C7 3258 aa22.09■■□□□ 1.13
CDHR4-201ENST00000343366 A0A1W2PPC1 479 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 TSPY2A6NKD2 308 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 PDHXO00330 501 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 SLC27A2O14975 620 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 TSPY3P0CV98 308 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 TSPY8P0CW00 308 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 PTPRAP18433 802 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 HSPA4P34932 840 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 SLC44A5Q8NCS7 719 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 KANSL2Q9H9L4 492 aa22.08■■□□□ 1.13
CDHR4-201ENST00000343366 UPF2Q9HAU5 1272 aaKnown RBP22.08■■□□□ 1.13
CDHR4-201ENST00000343366 PLIN4Q96Q06 1357 aa22.08■■□□□ 1.12
CDHR4-201ENST00000343366 DOCK3Q8IZD9 2030 aa22.07■■□□□ 1.12
CDHR4-201ENST00000343366 MYPNQ86TC9 1320 aa22.07■■□□□ 1.12
CDHR4-201ENST00000343366 MPHOSPH10O00566 681 aaKnown RBP22.07■■□□□ 1.12
CDHR4-201ENST00000343366 GH2P01242 217 aa22.07■■□□□ 1.12
CDHR4-201ENST00000343366 RALYLQ86SE5 291 aaKnown RBP22.07■■□□□ 1.12
CDHR4-201ENST00000343366 NCOA7Q8NI08 942 aa22.07■■□□□ 1.12
CDHR4-201ENST00000343366 HTATIP2Q9BUP3 242 aa22.07■■□□□ 1.12
CDHR4-201ENST00000343366 PHIPQ8WWQ0 1821 aa22.07■■□□□ 1.12
CDHR4-201ENST00000343366 SOX1O00570 391 aaPredicted RBP22.06■■□□□ 1.12
CDHR4-201ENST00000343366 RANBP6O60518 1105 aaKnown RBP22.06■■□□□ 1.12
CDHR4-201ENST00000343366 GDF11O95390 407 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 HOXD10P28358 340 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 EVX2Q03828 476 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 GPAT2Q6NUI2 795 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 IQCA1Q86XH1 822 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 TBC1D10CQ8IV04 446 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 NEDD1Q8NHV4 660 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 RAET1EQ8TD07 263 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 KCNB2Q92953 911 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 WDR18Q9BV38 432 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 NBPF3Q9H094 633 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 SH2D4AQ9H788 454 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 TCP11L1Q9NUJ3 509 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 SYNPO2Q9UMS6 1093 aa22.06■■□□□ 1.12
CDHR4-201ENST00000343366 E7EWF7 191 aa22.05■■□□□ 1.12
CDHR4-201ENST00000343366 CXCL11O14625 94 aa22.05■■□□□ 1.12
CDHR4-201ENST00000343366 HMGB1P09429 215 aaKnown RBP22.05■■□□□ 1.12
CDHR4-201ENST00000343366 TFAP4Q01664 338 aa22.05■■□□□ 1.12
CDHR4-201ENST00000343366 PRKCZQ05513 592 aa22.05■■□□□ 1.12
CDHR4-201ENST00000343366 STK11IPQ8N1F8 1099 aa22.05■■□□□ 1.12
CDHR4-201ENST00000343366 U2AF1L4Q8WU68 220 aaKnown RBP22.05■■□□□ 1.12
CDHR4-201ENST00000343366 MTA3Q9BTC8 594 aa22.05■■□□□ 1.12
CDHR4-201ENST00000343366 GREB1LQ9C091 1923 aaPredicted RBP22.05■■□□□ 1.12
CDHR4-201ENST00000343366 SMIM22K7EJ46 135 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 DLL1O00548 723 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 PRDM1O75626 825 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 ECM2O94769 699 aaPredicted RBP22.04■■□□□ 1.12
CDHR4-201ENST00000343366 SLURP2P0DP57 97 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 AKR1B1P15121 316 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 RRP1BQ14684 758 aaKnown RBP22.04■■□□□ 1.12
CDHR4-201ENST00000343366 RAB3GAP1Q15042 981 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 RRP12Q5JTH9 1297 aaKnown RBP22.04■■□□□ 1.12
CDHR4-201ENST00000343366 RNF208Q9H0X6 261 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 ARHGEF10LQ9HCE6 1279 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 ZHX2Q9Y6X8 837 aa22.04■■□□□ 1.12
CDHR4-201ENST00000343366 C19orf81C9J6K1 198 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 FMNL1O95466 1100 aaPredicted RBP22.03■■□□□ 1.12
CDHR4-201ENST00000343366 PSMA5P28066 241 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 ANAPC15P60006 121 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 ZNF280CQ8ND82 737 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 SLAIN1Q8ND83 568 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 TTC14Q96N46 770 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 UNC93B1Q9H1C4 597 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 NYAP2Q9P242 653 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 GABRQQ9UN88 632 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 AFG3L2Q9Y4W6 797 aa22.03■■□□□ 1.12
CDHR4-201ENST00000343366 FARP2O94887 1054 aaPredicted RBP22.02■■□□□ 1.12
CDHR4-201ENST00000343366 SGPL1O95470 568 aa22.02■■□□□ 1.12
CDHR4-201ENST00000343366 USP14P54578 494 aa22.02■■□□□ 1.12
CDHR4-201ENST00000343366 ICA1Q05084 483 aa22.02■■□□□ 1.12
CDHR4-201ENST00000343366 SART3Q15020 963 aaKnown RBP22.02■■□□□ 1.12
CDHR4-201ENST00000343366 NR2E3Q9Y5X4 410 aa22.02■■□□□ 1.12
CDHR4-201ENST00000343366 NEDD4P46934 1319 aa22.02■■□□□ 1.12
CDHR4-201ENST00000343366 LAMA2P24043 3122 aaKnown RBP22.02■■□□□ 1.11
CDHR4-201ENST00000343366 USP17L10C9JJH3 530 aa22.01■■□□□ 1.11
CDHR4-201ENST00000343366 TTLL1O95922 423 aa22.01■■□□□ 1.11
CDHR4-201ENST00000343366 SEPT2Q15019 361 aa22.01■■□□□ 1.11
CDHR4-201ENST00000343366 SLC17A8Q8NDX2 589 aa22.01■■□□□ 1.11
CDHR4-201ENST00000343366 PARK7Q99497 189 aaKnown RBP22.01■■□□□ 1.11
CDHR4-201ENST00000343366 MTMR4Q9NYA4 1195 aa22.01■■□□□ 1.11
CDHR4-201ENST00000343366 IGKV6D-41A0A0C4DH26 115 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 ERICH2A1L162 156 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 B4E1Z4 1266 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 KDM4AO75164 1064 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 CYP2C8P10632 490 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 GUCY1A2P33402 732 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 MCM5P33992 734 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 UBXN2AP68543 259 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 FAM47AQ5JRC9 791 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 FASTKD5Q7L8L6 764 aaKnown RBP22■■□□□ 1.11
CDHR4-201ENST00000343366 IL27Q8NEV9 243 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 NEK1Q96PY6 1258 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 UBAC1Q9BSL1 405 aa22■■□□□ 1.11
CDHR4-201ENST00000343366 ZSWIM5Q9P217 1185 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms