RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GOLGA6L7A0A1B0GV03 622 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 LMTK2Q8IWU2 1503 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 MED23Q9ULK4 1368 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 NRKQ7Z2Y5 1582 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 GOLGA6BA6NDN3 693 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 ATP1A2P50993 1020 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 VAV2P52735 878 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 UBE3CQ15386 1083 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 NELFCDQ8IXH7 590 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 MB21D2Q8IYB1 491 aaPredicted RBP13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 ABCB6Q9NP58 842 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 OVOS2A0A0J9YW53 1432 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 OVOS2Q6IE36 1432 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 FAM205CA6NFA0 338 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 SRGAP2O75044 1071 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 MAGEA1P43355 309 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 GRIN1Q05586 938 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 BRD3Q15059 726 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 RRAGAQ7L523 313 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 TRIM31Q9BZY9 425 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 GPR108Q9NPR9 543 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 NDUFAB1O14561 156 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 BUB1O43683 1085 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 FOXO4P98177 505 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 RASGRF1Q13972 1273 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 PDIA6Q15084 440 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 CFAP58Q5T655 872 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 METTL16Q86W50 562 aaKnown RBP13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 KLHL7Q8IXQ5 586 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 ENGASEQ8NFI3 743 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 SECISBP2LQ93073 1101 aaKnown RBP13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 FERMT2Q96AC1 680 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 ZSCAN10Q96SZ4 725 aaPredicted RBP13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 KIAA1210Q9ULL0 1709 aa13.92□□□□□ -0.18
SNRNP48-201ENST00000342415 ADGRB2O60241 1585 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 COPB1P53618 953 aaKnown RBP13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 KCTD16Q68DU8 428 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 FAM204AQ9H8W3 233 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 ADAM21Q9UKJ8 722 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 GDAQ9Y2T3 454 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 CEP170BQ9Y4F5 1589 aaPredicted RBP13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 B4DLN1 442 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 IFNAR1P17181 557 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 ARID4AP29374 1257 aaPredicted RBP13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 KRT79Q5XKE5 535 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 OTUD6BQ8N6M0 293 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 ENOX1Q8TC92 643 aaKnown RBP13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 STRBPQ96SI9 672 aaKnown RBP13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 SLC39A2Q9NP94 309 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 SOS2Q07890 1332 aaPredicted RBP13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 FMNL1O95466 1100 aaPredicted RBP13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 GUCY2FP51841 1108 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 ST5P78524 1137 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 C8orf74Q6P047 294 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 TTLL11Q8NHH1 800 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 SETDB2Q96T68 719 aa13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
SNRNP48-201ENST00000342415 TECP42680 631 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 FMR1Q06787 632 aaKnown RBP eCLIP13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 CC2D1AQ6P1N0 951 aaPredicted RBP13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 VPS36Q86VN1 386 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 MAPKAPK5Q8IW41 473 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 C6orf50Q9HD87 102 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 PIK3C2BO00750 1634 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 IFIH1Q9BYX4 1025 aaKnown RBP13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 BICDL2A1A5D9 508 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 CIAO1O76071 339 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 NEFHP12036 1026 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 DCAF17Q5H9S7 520 aaPredicted RBP13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
SNRNP48-201ENST00000342415 RPN1P04843 607 aaKnown RBP13.9□□□□□ -0.19
SNRNP48-201ENST00000342415 GNAQP50148 359 aa13.9□□□□□ -0.19
SNRNP48-201ENST00000342415 CEP57Q86XR8 500 aa13.9□□□□□ -0.19
SNRNP48-201ENST00000342415 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.19
SNRNP48-201ENST00000342415 PRDM4Q9UKN5 801 aa13.9□□□□□ -0.19
SNRNP48-201ENST00000342415 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 UBN2Q6ZU65 1347 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 HGSO14964 777 aaPredicted RBP13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 OPA1O60313 960 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 GSPT2Q8IYD1 628 aaKnown RBP13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 TRIM49BA6NDI0 452 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 ERVV-2B6SEH9 535 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 SLFN14P0C7P3 912 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 LIG3P49916 1009 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 ANTXR2P58335 489 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 SV2BQ7L1I2 683 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 NLRP10Q86W26 655 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 SUGCTQ9HAC7 445 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 BIN2Q9UBW5 565 aaPredicted RBP13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 LDHBP07195 334 aaKnown RBP13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 HIBADHP31937 336 aaKnown RBP13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 CHRNDQ07001 517 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 PLS1Q14651 629 aa13.89□□□□□ -0.19
SNRNP48-201ENST00000342415 NYAP1Q6ZVC0 841 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms