RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 UNC79Q9P2D8 2635 aa14.54□□□□□ -0.08
ATXN3-201ENST00000340660 COL4A6Q14031 1691 aa14.53□□□□□ -0.08
ATXN3-201ENST00000340660 ASCL5Q7RTU5 278 aa14.53□□□□□ -0.08
ATXN3-201ENST00000340660 SOCS4Q8WXH5 440 aa14.53□□□□□ -0.08
ATXN3-201ENST00000340660 REPIN1Q9BWE0 567 aaKnown RBP14.53□□□□□ -0.08
ATXN3-201ENST00000340660 ALG13Q9NP73 1137 aaKnown RBP14.53□□□□□ -0.08
ATXN3-201ENST00000340660 RALYQ9UKM9 306 aaKnown RBP14.53□□□□□ -0.08
ATXN3-201ENST00000340660 PTPRFP10586 1907 aa14.53□□□□□ -0.08
ATXN3-201ENST00000340660 DMXL1Q9Y485 3027 aa14.52□□□□□ -0.08
ATXN3-201ENST00000340660 FASNP49327 2511 aaKnown RBP14.52□□□□□ -0.08
ATXN3-201ENST00000340660 ZMYND10O75800 440 aa14.52□□□□□ -0.09
ATXN3-201ENST00000340660 HSP90B1P14625 803 aaKnown RBP14.52□□□□□ -0.09
ATXN3-201ENST00000340660 Q3C1V9 767 aa14.52□□□□□ -0.09
ATXN3-201ENST00000340660 KNSTRNQ9Y448 316 aa14.52□□□□□ -0.09
ATXN3-201ENST00000340660 PLXNA3P51805 1871 aa14.52□□□□□ -0.09
ATXN3-201ENST00000340660 GBF1Q92538 1859 aa14.52□□□□□ -0.09
ATXN3-201ENST00000340660 GVINP1Q7Z2Y8 2422 aa14.52□□□□□ -0.09
ATXN3-201ENST00000340660 MYBBP1AQ9BQG0 1328 aaKnown RBP14.51□□□□□ -0.09
ATXN3-201ENST00000340660 HOXA2O43364 376 aa14.51□□□□□ -0.09
ATXN3-201ENST00000340660 GCLCP48506 637 aaPredicted RBP14.51□□□□□ -0.09
ATXN3-201ENST00000340660 USP46P62068 366 aa14.51□□□□□ -0.09
ATXN3-201ENST00000340660 ACAP1Q15027 740 aa14.51□□□□□ -0.09
ATXN3-201ENST00000340660 PPP2R2DQ66LE6 453 aa14.51□□□□□ -0.09
ATXN3-201ENST00000340660 FERMT2Q96AC1 680 aa14.51□□□□□ -0.09
ATXN3-201ENST00000340660 GREM2Q9H772 168 aa14.51□□□□□ -0.09
ATXN3-201ENST00000340660 MSCO60682 206 aa14.5□□□□□ -0.09
ATXN3-201ENST00000340660 PEX10O60683 326 aa14.5□□□□□ -0.09
ATXN3-201ENST00000340660 PTPRAP18433 802 aa14.5□□□□□ -0.09
ATXN3-201ENST00000340660 ADCYAP1R1P41586 468 aa14.5□□□□□ -0.09
ATXN3-201ENST00000340660 RPIAP49247 311 aa14.5□□□□□ -0.09
ATXN3-201ENST00000340660 MFSD14BQ5SR56 506 aa14.5□□□□□ -0.09
ATXN3-201ENST00000340660 VPS13AQ96RL7 3174 aa14.5□□□□□ -0.09
ATXN3-201ENST00000340660 EPOPA6NHQ4 379 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 KBTBD13C9JR72 458 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 PCCAP05165 728 aaPredicted RBP14.49□□□□□ -0.09
ATXN3-201ENST00000340660 MYOGP15173 224 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 IL9P15248 144 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 CNGA1P29973 690 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 KCNJ4P48050 445 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 CTSWP56202 376 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 C15orf52Q6ZUT6 534 aaKnown RBP14.49□□□□□ -0.09
ATXN3-201ENST00000340660 APBA2Q99767 749 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 FLRT1Q9NZU1 646 aa14.49□□□□□ -0.09
ATXN3-201ENST00000340660 GAKO14976 1311 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 RGS2P41220 211 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 RABGGTBP53611 331 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 GRIK5Q16478 980 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 ARRDC4Q8NCT1 418 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 TRPV1Q8NER1 839 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 PRRX2Q99811 253 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 ANKRD2Q9GZV1 360 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 TMEM39AQ9NV64 488 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 PKD2L1Q9P0L9 805 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 MORF4L1Q9UBU8 362 aa14.48□□□□□ -0.09
ATXN3-201ENST00000340660 USP24Q9UPU5 2620 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 UTYO14607 1347 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 TRIM75PA6NK02 468 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 PQBP1O60828 265 aaKnown RBP14.47□□□□□ -0.09
ATXN3-201ENST00000340660 MMP16P51512 607 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 FKBP1CQ5VVH2 108 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 ZNF365Q70YC5 407 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 ZNF804AQ7Z570 1209 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 SCYL3Q8IZE3 742 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 KRI1Q8N9T8 703 aaKnown RBP14.47□□□□□ -0.09
ATXN3-201ENST00000340660 TTLL11Q8NHH1 800 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
ATXN3-201ENST00000340660 MAP1BP46821 2468 aaKnown RBP14.47□□□□□ -0.09
ATXN3-201ENST00000340660 WDR87Q6ZQQ6 2873 aa14.46□□□□□ -0.09
ATXN3-201ENST00000340660 PROB1E7EW31 1015 aa14.46□□□□□ -0.09
ATXN3-201ENST00000340660 ACRP10323 421 aa14.46□□□□□ -0.09
ATXN3-201ENST00000340660 EIF4G2P78344 907 aaKnown RBP eCLIP14.46□□□□□ -0.09
ATXN3-201ENST00000340660 GUCA2AQ02747 115 aa14.46□□□□□ -0.09
ATXN3-201ENST00000340660 SLC44A5Q8NCS7 719 aa14.46□□□□□ -0.09
ATXN3-201ENST00000340660 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.46□□□□□ -0.09
ATXN3-201ENST00000340660 USB1Q9BQ65 265 aaKnown RBP14.46□□□□□ -0.09
ATXN3-201ENST00000340660 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.46□□□□□ -0.09
ATXN3-201ENST00000340660 GPR179Q6PRD1 2367 aa14.46□□□□□ -0.1
ATXN3-201ENST00000340660 TECTAO75443 2155 aa14.46□□□□□ -0.1
ATXN3-201ENST00000340660 ZNF521Q96K83 1311 aa14.45□□□□□ -0.1
ATXN3-201ENST00000340660 PRR23AA6NEV1 266 aa14.45□□□□□ -0.1
ATXN3-201ENST00000340660 PHF20L1A8MW92 1017 aa14.45□□□□□ -0.1
ATXN3-201ENST00000340660 TIMP1P01033 207 aa14.45□□□□□ -0.1
ATXN3-201ENST00000340660 CHRNDQ07001 517 aa14.45□□□□□ -0.1
ATXN3-201ENST00000340660 FAAP100Q0VG06 881 aa14.45□□□□□ -0.1
ATXN3-201ENST00000340660 PPIGQ13427 754 aaKnown RBP eCLIP14.45□□□□□ -0.1
ATXN3-201ENST00000340660 ANO1Q5XXA6 986 aa14.45□□□□□ -0.1
ATXN3-201ENST00000340660 CCDC84Q86UT8 332 aaPredicted RBP14.45□□□□□ -0.1
ATXN3-201ENST00000340660 ATOH1Q92858 354 aaPredicted RBP14.45□□□□□ -0.1
ATXN3-201ENST00000340660 ASCC2Q9H1I8 757 aaPredicted RBP14.45□□□□□ -0.1
ATXN3-201ENST00000340660 TMOD2Q9NZR1 351 aa14.45□□□□□ -0.1
ATXN3-201ENST00000340660 ZNF292O60281 2723 aa14.44□□□□□ -0.1
ATXN3-201ENST00000340660 PHIPQ8WWQ0 1821 aa14.44□□□□□ -0.1
ATXN3-201ENST00000340660 PKDCCQ504Y2 493 aa14.44□□□□□ -0.1
ATXN3-201ENST00000340660 MFSD14CQ5VZR4 134 aa14.44□□□□□ -0.1
ATXN3-201ENST00000340660 MFSD5Q6N075 450 aa14.44□□□□□ -0.1
ATXN3-201ENST00000340660 CERS4Q9HA82 394 aa14.44□□□□□ -0.1
ATXN3-201ENST00000340660 TXNRD2Q9NNW7 524 aa14.44□□□□□ -0.1
ATXN3-201ENST00000340660 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
ATXN3-201ENST00000340660 DBF4Q9UBU7 674 aaPredicted RBP14.44□□□□□ -0.1
ATXN3-201ENST00000340660 TSPYL4Q9UJ04 414 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms