RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 DOK7Q18PE1 504 aa22.35■■□□□ 1.17
NHLRC1-201ENST00000340650 SLC4A8Q2Y0W8 1093 aa22.35■■□□□ 1.17
NHLRC1-201ENST00000340650 TEX35Q5T0J7 233 aa22.35■■□□□ 1.17
NHLRC1-201ENST00000340650 CTR9Q6PD62 1173 aa22.35■■□□□ 1.17
NHLRC1-201ENST00000340650 MAP3K14Q99558 947 aa22.35■■□□□ 1.17
NHLRC1-201ENST00000340650 KRT23Q9C075 422 aa22.35■■□□□ 1.17
NHLRC1-201ENST00000340650 INTS13Q9NVM9 706 aa22.35■■□□□ 1.17
NHLRC1-201ENST00000340650 TIAM2Q8IVF5 1701 aa22.35■■□□□ 1.17
NHLRC1-201ENST00000340650 BAZ2AQ9UIF9 1905 aaKnown RBP22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 MAP3K9P80192 1104 aa22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 TMEM67Q5HYA8 995 aa22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 METTL16Q86W50 562 aaKnown RBP22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 IGDCC4Q8TDY8 1250 aa22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 ALG1Q9BT22 464 aa22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 FANCLQ9NW38 375 aa22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 TULP2O00295 520 aa22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 RXRAP19793 462 aa22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 IRX5P78411 483 aaPredicted RBP22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 ELOA2Q8IYF1 753 aaPredicted RBP22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 GPR161Q8N6U8 529 aaKnown RBP22.34■■□□□ 1.17
NHLRC1-201ENST00000340650 IFIT3O14879 490 aaKnown RBP22.33■■□□□ 1.17
NHLRC1-201ENST00000340650 CUTAO60888 179 aa22.33■■□□□ 1.17
NHLRC1-201ENST00000340650 PRDM1O75626 825 aa22.33■■□□□ 1.17
NHLRC1-201ENST00000340650 GSTO1P78417 241 aa22.33■■□□□ 1.17
NHLRC1-201ENST00000340650 SH3RF3Q8TEJ3 882 aaPredicted RBP22.33■■□□□ 1.17
NHLRC1-201ENST00000340650 RNF41Q9H4P4 317 aaPredicted RBP22.33■■□□□ 1.17
NHLRC1-201ENST00000340650 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.33■■□□□ 1.17
NHLRC1-201ENST00000340650 CHD4Q14839 1912 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 SEC31AO94979 1220 aaKnown RBP22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 TBC1D8O95759 1140 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 GOLGA8FQ08AF8 430 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 GOLGA8DPQ0D2H9 430 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 KRT40Q6A162 431 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 STYK1Q6J9G0 422 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 CC2D1AQ6P1N0 951 aaPredicted RBP22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 NFXL1Q6ZNB6 911 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 KRBA2Q6ZNG9 492 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 TMEM87BQ96K49 555 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 COA1Q9GZY4 146 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 LY9Q9HBG7 655 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 ANAPC4Q9UJX5 808 aa22.33■■□□□ 1.16
NHLRC1-201ENST00000340650 CDKL5O76039 1030 aa22.32■■□□□ 1.16
NHLRC1-201ENST00000340650 CYP2D6P10635 497 aa22.32■■□□□ 1.16
NHLRC1-201ENST00000340650 CASQ1P31415 396 aa22.32■■□□□ 1.16
NHLRC1-201ENST00000340650 RSRC2Q7L4I2 434 aaKnown RBP22.32■■□□□ 1.16
NHLRC1-201ENST00000340650 STX10O60499 249 aa22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 MICU3Q86XE3 530 aa22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 FOXP4Q8IVH2 680 aaPredicted RBP22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 AIFM3Q96NN9 605 aa22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 BAG1Q99933 345 aaPredicted RBP22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 MYL10Q9BUA6 226 aa22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 ATP8A2Q9NTI2 1148 aa22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 MRFAP1Q9Y605 127 aa22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 HNRNPH2P55795 449 aaKnown RBP22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 TMED8Q6PL24 325 aaPredicted RBP22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 PCDHA5Q9Y5H7 936 aa22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 ECM29Q5VYK3 1845 aa22.31■■□□□ 1.16
NHLRC1-201ENST00000340650 SASH3O75995 380 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 USP5P45974 858 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 LONRF3Q496Y0 759 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 APOA5Q6Q788 366 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 WDR24Q96S15 920 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 MXD3Q9BW11 206 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 RTFDC1Q9BY42 306 aaPredicted RBP22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 MCM9Q9NXL9 1143 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 F8W031 263 aaPredicted RBP22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 G3V3G9 751 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 BAG3O95817 575 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 USP17L8P0C7I0 530 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 PPP2R3AQ06190 1150 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 PDE4BQ07343 736 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 DCAF8Q5TAQ9 597 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 TBC1D22AQ8WUA7 517 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 KIFC2Q96AC6 838 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 CLIC6Q96NY7 704 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 QSER1Q2KHR3 1735 aa22.3■■□□□ 1.16
NHLRC1-201ENST00000340650 BMP6P22004 513 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 BTDP43251 543 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 METAP2P50579 478 aaKnown RBP eCLIP22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 GNG11P61952 73 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 MDM2Q00987 491 aaPredicted RBP22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 CNNM3Q8NE01 707 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 DBNDD1Q9H9R9 158 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 KCNH3Q9ULD8 1083 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 SLX4Q8IY92 1834 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 FAM205AQ6ZU69 1335 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 LDHCP07864 332 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 TXLNBQ8N3L3 684 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 TC2NQ8N9U0 490 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 TGFBRAP1Q8WUH2 860 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 ESR2Q92731 530 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 CNKSR1Q969H4 720 aa22.29■■□□□ 1.16
NHLRC1-201ENST00000340650 POLR3GO15318 223 aaPredicted RBP22.28■■□□□ 1.16
NHLRC1-201ENST00000340650 RANBP6O60518 1105 aaKnown RBP22.28■■□□□ 1.16
NHLRC1-201ENST00000340650 RABGGTAQ92696 567 aa22.28■■□□□ 1.16
NHLRC1-201ENST00000340650 ZNF18P17022 549 aa22.27■■□□□ 1.16
NHLRC1-201ENST00000340650 CDC27P30260 824 aa22.27■■□□□ 1.16
NHLRC1-201ENST00000340650 LIFRP42702 1097 aa22.27■■□□□ 1.16
NHLRC1-201ENST00000340650 SART3Q15020 963 aaKnown RBP22.27■■□□□ 1.16
NHLRC1-201ENST00000340650 CPLX2Q6PUV4 134 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms