RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 RINT1Q6NUQ1 792 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 E9PMD0 336 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 KLHL30Q0D2K2 578 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 TBC1D7Q9P0N9 293 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 HADHQ16836 314 aaKnown RBP15.24■□□□□ 0.03
PDE4D-203ENST00000340635 CDKL2Q92772 493 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 GLT8D2Q9H1C3 349 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 TYW1Q9NV66 732 aaKnown RBP15.24■□□□□ 0.03
PDE4D-203ENST00000340635 METTL13Q8N6R0 699 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 IFT122Q9HBG6 1241 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 MCUQ8NE86 351 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 RTEL1Q9NZ71 1219 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 DNM3Q9UQ16 869 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 ATL3Q6DD88 541 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 RHPN1Q8TCX5 695 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 TRIM27P14373 513 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 ATF7P17544 494 aaPredicted RBP15.23■□□□□ 0.03
PDE4D-203ENST00000340635 CLTAP09496 248 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 RYBPQ8N488 228 aaPredicted RBP15.23■□□□□ 0.03
PDE4D-203ENST00000340635 CDV3Q9UKY7 258 aaKnown RBP15.23■□□□□ 0.03
PDE4D-203ENST00000340635 SKAP1Q86WV1 359 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 FBXL13Q8NEE6 735 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 LMCD1Q9NZU5 365 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 NPHP3Q7Z494 1330 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 A0A1B0GVL5 298 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 POLR2BP30876 1174 aaKnown RBP15.23■□□□□ 0.03
PDE4D-203ENST00000340635 TTC6Q86TZ1 520 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 RNF169Q8NCN4 708 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 EFHD1Q9BUP0 239 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 GUCY2FP51841 1108 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 KSR1Q8IVT5 923 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
PDE4D-203ENST00000340635 EFCAB14O75071 495 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 IL15P40933 162 aaPredicted RBP15.22■□□□□ 0.03
PDE4D-203ENST00000340635 SNX1Q13596 522 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 LRRC8CQ8TDW0 803 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 LONRF3Q496Y0 759 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 MMS19Q96T76 1030 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 TTC1Q99614 292 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 VGLL3A8MV65 326 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 OAS2P29728 719 aaKnown RBP15.22■□□□□ 0.03
PDE4D-203ENST00000340635 KRT33BQ14525 404 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 MYSM1Q5VVJ2 828 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 CAPN12Q6ZSI9 719 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 NSFL1CQ9UNZ2 370 aaKnown RBP15.22■□□□□ 0.03
PDE4D-203ENST00000340635 SRGAP2BP0DMP2 458 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 IWS1Q96ST2 819 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 ANKRD2Q9GZV1 360 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 SDSP20132 328 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 RCN2Q14257 317 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 BRD3Q15059 726 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 ARHGAP44Q17R89 818 aa15.22■□□□□ 0.03
PDE4D-203ENST00000340635 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 ARHGEF9O43307 516 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 LMNB2Q03252 620 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 FLOT2Q14254 428 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 SUPT6HQ7KZ85 1726 aaKnown RBP15.21■□□□□ 0.03
PDE4D-203ENST00000340635 H3BRJ5 948 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 ZSCAN26Q16670 478 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 TRIM59Q8IWR1 403 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 TRPA1O75762 1119 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 NMIQ13287 307 aaPredicted RBP15.21■□□□□ 0.03
PDE4D-203ENST00000340635 SNCBQ16143 134 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 TMTC3Q6ZXV5 915 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 ESYT1Q9BSJ8 1104 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 KRT10P13645 584 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 TXKP42681 527 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 SNX21Q969T3 373 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 PIP4K2CQ8TBX8 421 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 ACSBG1Q96GR2 724 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 TTC21BQ7Z4L5 1316 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 RAD50Q92878 1312 aa15.21■□□□□ 0.03
PDE4D-203ENST00000340635 RNF113AO15541 343 aaKnown RBP15.21■□□□□ 0.02
PDE4D-203ENST00000340635 CARD6Q9BX69 1037 aa15.21■□□□□ 0.02
PDE4D-203ENST00000340635 PLEKHA4Q9H4M7 779 aa15.21■□□□□ 0.02
PDE4D-203ENST00000340635 POLR2DO15514 142 aaKnown RBP15.21■□□□□ 0.02
PDE4D-203ENST00000340635 TRMT10CQ7L0Y3 403 aaKnown RBP15.21■□□□□ 0.02
PDE4D-203ENST00000340635 JAG2Q9Y219 1238 aa15.21■□□□□ 0.02
PDE4D-203ENST00000340635 DAAM1Q9Y4D1 1078 aa15.21■□□□□ 0.02
PDE4D-203ENST00000340635 PUM3Q15397 648 aaKnown RBP15.2■□□□□ 0.02
PDE4D-203ENST00000340635 CALCRLQ16602 461 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 FAM47CQ5HY64 1035 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 PIK3AP1Q6ZUJ8 805 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 OTUD6AQ7L8S5 288 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 IFIH1Q9BYX4 1025 aaKnown RBP15.2■□□□□ 0.02
PDE4D-203ENST00000340635 ZC3H12BQ5HYM0 836 aaKnown RBP15.2■□□□□ 0.02
PDE4D-203ENST00000340635 KRT80Q6KB66 452 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 TMTC1Q8IUR5 882 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 SCOCQ9UIL1 159 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 TMEM247A6NEH6 219 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 HLA-DPA1P20036 260 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 FOXD4Q12950 439 aaPredicted RBP15.2■□□□□ 0.02
PDE4D-203ENST00000340635 PDXDC1Q6P996 788 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 TEX12Q9BXU0 123 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 EPRSP07814 1512 aaKnown RBP15.2■□□□□ 0.02
PDE4D-203ENST00000340635 ZBED4O75132 1171 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 HERC4Q5GLZ8 1057 aaPredicted RBP15.2■□□□□ 0.02
PDE4D-203ENST00000340635 LZICQ8WZA0 190 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 EEF1GP26641 437 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms