RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MED23Q9ULK4 1368 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 SLC16A2P36021 539 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 RASA3Q14644 834 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 RILPL1Q5EBL4 403 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 LRFN2Q9ULH4 789 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 KCNH4Q9UQ05 1017 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 TPH2Q8IWU9 490 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 VPS54Q9P1Q0 977 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 CCDC172P0C7W6 258 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 BIRC3Q13489 604 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 Q3C1V9 767 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 CCDC183Q5T5S1 534 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 PLA2G4DQ86XP0 818 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 DIS3L2Q8IYB7 885 aaKnown RBP14.45□□□□□ -0.1
LIN54-201ENST00000340417 NRBP2Q9NSY0 501 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 MROH7-TTC4A0A0A0MT08 1334 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 CCND2P30279 289 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 TTC38Q5R3I4 469 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 SNX29Q8TEQ0 813 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 TBC1D32Q96NH3 1257 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 NUP88Q99567 741 aaPredicted RBP14.45□□□□□ -0.1
LIN54-201ENST00000340417 USP26Q9BXU7 913 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 COL5A2P05997 1499 aaPredicted RBP14.45□□□□□ -0.1
LIN54-201ENST00000340417 M0R2C6 588 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 ABI1Q8IZP0 508 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 SUGCTQ9HAC7 445 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 LRWD1Q9UFC0 647 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 ZMYM1Q5SVZ6 1142 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 TBC1D2Q9BYX2 928 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 MYOZ2Q9NPC6 264 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 SUGT1Q9Y2Z0 365 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 NTSR2O95665 410 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 CMTR1Q8N1G2 835 aaKnown RBP14.44□□□□□ -0.1
LIN54-201ENST00000340417 MRPS27Q92552 414 aaKnown RBP14.44□□□□□ -0.1
LIN54-201ENST00000340417 FAM196BA6NMK8 535 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 TEKT3Q9BXF9 490 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 ADARB2Q9NS39 739 aaKnown RBP14.44□□□□□ -0.1
LIN54-201ENST00000340417 SAMD7Q7Z3H4 446 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 DEPTORQ8TB45 409 aa14.44□□□□□ -0.1
LIN54-201ENST00000340417 MCAMP43121 646 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 FILIP1Q7Z7B0 1213 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 IQUBQ8NA54 791 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 WDR70Q9NW82 654 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 GPS2Q13227 327 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 ERLIN2O94905 339 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 MYL3P08590 195 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 RETREG2Q8NC44 543 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 FOSP01100 380 aaPredicted RBP14.43□□□□□ -0.1
LIN54-201ENST00000340417 UBXN2AP68543 259 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 TRPC3Q13507 836 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 ZBTB8OSQ8IWT0 167 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 FANCBQ8NB91 859 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 FRMD4BQ9Y2L6 1034 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 FAM84BQ96KN1 310 aaPredicted RBP14.43□□□□□ -0.1
LIN54-201ENST00000340417 RTEL1Q9NZ71 1219 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 FBXO40Q9UH90 709 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 KCNG1Q9UIX4 513 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 KCNJ14Q9UNX9 436 aa14.43□□□□□ -0.1
LIN54-201ENST00000340417 CTNNA2P26232 953 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 MACROD2A1Z1Q3 448 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 SLC8A3P57103 927 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 SLF1Q9BQI6 1058 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 CYP2D7A0A087X1C5 515 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 TMED8Q6PL24 325 aaPredicted RBP14.42□□□□□ -0.1
LIN54-201ENST00000340417 ZBED2Q9BTP6 218 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 DEPDC5O75140 1603 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 RPL13P26373 211 aaKnown RBP14.42□□□□□ -0.1
LIN54-201ENST00000340417 PRAMEF18Q5VWM3 479 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 GPKOWQ92917 476 aaPredicted RBP eCLIP14.42□□□□□ -0.1
LIN54-201ENST00000340417 SPAG5Q96R06 1193 aa14.42□□□□□ -0.1
LIN54-201ENST00000340417 LLPHQ9BRT6 129 aaKnown RBP14.42□□□□□ -0.1
LIN54-201ENST00000340417 ZNF215Q9UL58 517 aaPredicted RBP14.42□□□□□ -0.1
LIN54-201ENST00000340417 CPLX3Q8WVH0 158 aa14.41□□□□□ -0.1
LIN54-201ENST00000340417 PARK7Q99497 189 aaKnown RBP14.41□□□□□ -0.1
LIN54-201ENST00000340417 GTPBP4Q9BZE4 634 aaKnown RBP14.41□□□□□ -0.1
LIN54-201ENST00000340417 MEGF6O75095 1541 aa14.41□□□□□ -0.1
LIN54-201ENST00000340417 TNNT1P13805 278 aa14.41□□□□□ -0.1
LIN54-201ENST00000340417 XKR9Q5GH70 373 aa14.41□□□□□ -0.1
LIN54-201ENST00000340417 FAM102BQ5T8I3 360 aa14.41□□□□□ -0.1
LIN54-201ENST00000340417 PUS7LQ9H0K6 701 aaKnown RBP14.41□□□□□ -0.1
LIN54-201ENST00000340417 CDR1P51861 262 aa14.41□□□□□ -0.1
LIN54-201ENST00000340417 STX1AQ16623 288 aa14.41□□□□□ -0.1
LIN54-201ENST00000340417 SYCE3A1L190 88 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 YEATS4O95619 227 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 FAM83BQ5T0W9 1011 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 MYCT1Q8N699 235 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 AGBL3Q8NEM8 1001 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 ADPGKQ9BRR6 497 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 ZNF70Q9UC06 446 aaPredicted RBP14.4□□□□□ -0.1
LIN54-201ENST00000340417 WDR44Q5JSH3 913 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 FAM177A1Q8N128 213 aaPredicted RBP14.4□□□□□ -0.1
LIN54-201ENST00000340417 CDHR1Q96JP9 859 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 FERMT1Q9BQL6 677 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 FTOQ9C0B1 505 aaKnown RBP eCLIP14.4□□□□□ -0.1
LIN54-201ENST00000340417 NEMFO60524 1076 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 BLIDQ8IZY5 108 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 MMP19Q99542 508 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 CEP83Q9Y592 693 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 F13A1P00488 732 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms