RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 NMIQ13287 307 aaPredicted RBP17.42■□□□□ 0.38
ERCC1-203ENST00000340192 MCMDC2Q4G0Z9 681 aa17.42■□□□□ 0.38
ERCC1-203ENST00000340192 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
ERCC1-203ENST00000340192 PAGR1Q9BTK6 254 aa17.42■□□□□ 0.38
ERCC1-203ENST00000340192 ZNF287Q9HBT7 754 aa17.42■□□□□ 0.38
ERCC1-203ENST00000340192 POTEFA5A3E0 1075 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 MYCP01106 439 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-203ENST00000340192 PDE4AP27815 886 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 GRK4P32298 578 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 ERVK-9P63128 1117 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 ERVK-24P63145 666 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 PPARAQ07869 468 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 Q3C1V9 767 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 SPICE1Q8N0Z3 855 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 LPAR1Q92633 364 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 TANGO6Q9C0B7 1094 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 VCPKMTQ9H867 229 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 A0A0G2JMZ2 1700 aa17.41■□□□□ 0.38
ERCC1-203ENST00000340192 SPDYE16A6NNV3 312 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-203ENST00000340192 CNMDO75829 334 aa17.4■□□□□ 0.38
ERCC1-203ENST00000340192 SLC3A2P08195 630 aaKnown RBP17.4■□□□□ 0.38
ERCC1-203ENST00000340192 SDSP20132 328 aa17.4■□□□□ 0.38
ERCC1-203ENST00000340192 PDE4BQ07343 736 aa17.4■□□□□ 0.38
ERCC1-203ENST00000340192 LBX2Q6XYB7 198 aa17.4■□□□□ 0.38
ERCC1-203ENST00000340192 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-203ENST00000340192 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-203ENST00000340192 SLAIN1Q8ND83 568 aa17.4■□□□□ 0.38
ERCC1-203ENST00000340192 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
ERCC1-203ENST00000340192 ADCY3O60266 1144 aa17.39■□□□□ 0.37
ERCC1-203ENST00000340192 IRF5Q13568 498 aa17.39■□□□□ 0.37
ERCC1-203ENST00000340192 COG2Q14746 738 aa17.39■□□□□ 0.37
ERCC1-203ENST00000340192 TMEM106CQ9BVX2 250 aa17.39■□□□□ 0.37
ERCC1-203ENST00000340192 PORCNQ9H237 461 aa17.39■□□□□ 0.37
ERCC1-203ENST00000340192 GOPCQ9HD26 462 aa17.39■□□□□ 0.37
ERCC1-203ENST00000340192 BIN2Q9UBW5 565 aaPredicted RBP17.39■□□□□ 0.37
ERCC1-203ENST00000340192 COL11A1P12107 1806 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-203ENST00000340192 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 ELNP15502 786 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 MAPK4P31152 587 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 CTDSPL2Q05D32 466 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 ALX1Q15699 326 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 CCAR1Q8IX12 1150 aaKnown RBP17.38■□□□□ 0.37
ERCC1-203ENST00000340192 HOXC10Q9NYD6 342 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 BTBD7Q9P203 1132 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 NYAP2Q9P242 653 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 GJD2Q9UKL4 321 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
ERCC1-203ENST00000340192 KIAA0100Q14667 2235 aaKnown RBP17.37■□□□□ 0.37
ERCC1-203ENST00000340192 WDR46O15213 610 aaKnown RBP17.37■□□□□ 0.37
ERCC1-203ENST00000340192 RAD21O60216 631 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 FLOT1O75955 427 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 FGAP02671 866 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 TSPY3P0CV98 308 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 TSPY8P0CW00 308 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 HSPD1P10809 573 aaKnown RBP17.37■□□□□ 0.37
ERCC1-203ENST00000340192 MTFR1Q15390 333 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 FAM47AQ5JRC9 791 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 PXYLP1Q8TE99 480 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 CEP95Q96GE4 821 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 ANAPC4Q9UJX5 808 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 PLIN4Q96Q06 1357 aa17.37■□□□□ 0.37
ERCC1-203ENST00000340192 EN2P19622 333 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-203ENST00000340192 MFAP1P55081 439 aaKnown RBP17.36■□□□□ 0.37
ERCC1-203ENST00000340192 UBXN2AP68543 259 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 CCNA1P78396 465 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 TTC22Q5TAA0 569 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 CWC27Q6UX04 472 aaKnown RBP17.36■□□□□ 0.37
ERCC1-203ENST00000340192 GPR142Q7Z601 462 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 INCENPQ9NQS7 918 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 MTMR4Q9NYA4 1195 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 CLIP2Q9UDT6 1046 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.36■□□□□ 0.37
ERCC1-203ENST00000340192 ZMYM6O95789 1325 aa17.36■□□□□ 0.37
ERCC1-203ENST00000340192 HIP1O00291 1037 aa17.35■□□□□ 0.37
ERCC1-203ENST00000340192 INHAP05111 366 aa17.35■□□□□ 0.37
ERCC1-203ENST00000340192 CCL5P13501 91 aa17.35■□□□□ 0.37
ERCC1-203ENST00000340192 GSPT1P15170 499 aaKnown RBP17.35■□□□□ 0.37
ERCC1-203ENST00000340192 DSG3P32926 999 aa17.35■□□□□ 0.37
ERCC1-203ENST00000340192 TFAP4Q01664 338 aa17.35■□□□□ 0.37
ERCC1-203ENST00000340192 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
ERCC1-203ENST00000340192 PLEKHH3Q7Z736 793 aa17.35■□□□□ 0.37
ERCC1-203ENST00000340192 CWC22Q9HCG8 908 aaKnown RBP17.35■□□□□ 0.37
ERCC1-203ENST00000340192 TACC3Q9Y6A5 838 aa17.35■□□□□ 0.37
ERCC1-203ENST00000340192 LAMA4Q16363 1823 aa17.35■□□□□ 0.37
ERCC1-203ENST00000340192 TTLL1O95922 423 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 FAM83BQ5T0W9 1011 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 WDR78Q5VTH9 848 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 MB21D1Q8N884 522 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 SOCS4Q8WXH5 440 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 MKL1Q969V6 931 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 ATG4CQ96DT6 458 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 NUDT12Q9BQG2 462 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 FBXO28Q9NVF7 368 aa17.34■□□□□ 0.37
ERCC1-203ENST00000340192 TSPY2A6NKD2 308 aa17.33■□□□□ 0.36
ERCC1-203ENST00000340192 F5H6K3 240 aa17.33■□□□□ 0.36
ERCC1-203ENST00000340192 NDUFB10O96000 172 aa17.33■□□□□ 0.36
ERCC1-203ENST00000340192 CYP2B6P20813 491 aa17.33■□□□□ 0.36
ERCC1-203ENST00000340192 KLRC3Q07444 240 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms