RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 PALM3A6NDB9 673 aaPredicted RBP9.12□□□□□ -0.95
TMC1-202ENST00000340019 ICA1Q05084 483 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 DCAF15Q66K64 600 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 CPLX2Q6PUV4 134 aaKnown RBP9.12□□□□□ -0.95
TMC1-202ENST00000340019 TMTC3Q6ZXV5 915 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 SULF1Q8IWU6 871 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 LRRC47Q8N1G4 583 aaKnown RBP9.12□□□□□ -0.95
TMC1-202ENST00000340019 CTCFLQ8NI51 663 aaPredicted RBP9.12□□□□□ -0.95
TMC1-202ENST00000340019 SYNPO2Q9UMS6 1093 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 ADM5C9JUS6 153 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 CTNND1O60716 968 aaKnown RBP9.11□□□□□ -0.95
TMC1-202ENST00000340019 PPFIA3O75145 1194 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 PLEKHA8P1O95397 391 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 FMNL1O95466 1100 aaPredicted RBP9.11□□□□□ -0.95
TMC1-202ENST00000340019 BRD1O95696 1058 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 PDHBP11177 359 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 SUPT20HL1Q3ZLR7 823 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 RASGRP2Q7LDG7 609 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 KRT26Q7Z3Y9 468 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 CMTR1Q8N1G2 835 aaKnown RBP9.11□□□□□ -0.95
TMC1-202ENST00000340019 PHKBQ93100 1093 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 ZNF341Q9BYN7 854 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 GINM1Q9NU53 330 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 DCAF8L1A6NGE4 600 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 ASNSP08243 561 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
TMC1-202ENST00000340019 KIF5BP33176 963 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 DLK2Q6UY11 383 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 STAG2Q8N3U4 1231 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 SRBD1Q8N5C6 995 aaKnown RBP9.11□□□□□ -0.95
TMC1-202ENST00000340019 PHIPQ8WWQ0 1821 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 OTOFQ9HC10 1997 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 A0A1W2PRG0 241 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 STX6O43752 255 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 PDCP20941 246 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 LARP1BQ659C4 914 aaKnown RBP9.11□□□□□ -0.95
TMC1-202ENST00000340019 FAM184AQ8NB25 1140 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 GMCL1P1Q8NEA9 526 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 KLRG1Q96E93 195 aa9.11□□□□□ -0.95
TMC1-202ENST00000340019 RNF26Q9BY78 433 aaPredicted RBP9.11□□□□□ -0.95
TMC1-202ENST00000340019 ORC3Q9UBD5 711 aaPredicted RBP9.11□□□□□ -0.95
TMC1-202ENST00000340019 BAZ2BQ9UIF8 2168 aaKnown RBP9.1□□□□□ -0.95
TMC1-202ENST00000340019 USP17L5A8MUK1 530 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 EAPPQ56P03 285 aaPredicted RBP9.1□□□□□ -0.95
TMC1-202ENST00000340019 USP17L2Q6R6M4 530 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.1□□□□□ -0.95
TMC1-202ENST00000340019 MTMR6Q9Y217 621 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 TMX2Q9Y320 296 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 CNTNAP5Q8WYK1 1306 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 UBE2Q2LH0YL09 131 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 USP2O75604 605 aaPredicted RBP9.1□□□□□ -0.95
TMC1-202ENST00000340019 PARP1P09874 1014 aaKnown RBP9.1□□□□□ -0.95
TMC1-202ENST00000340019 POTEIP0CG38 1075 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 POTEJP0CG39 1038 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 VEGFAP15692 232 aaPredicted RBP9.1□□□□□ -0.95
TMC1-202ENST00000340019 INPP5BP32019 993 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 ATP2B2Q01814 1243 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 SSRP1Q08945 709 aaKnown RBP9.1□□□□□ -0.95
TMC1-202ENST00000340019 SLC35G1Q2M3R5 365 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 RGS22Q8NE09 1264 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 SLC26A6Q9BXS9 759 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 FZD1Q9UP38 647 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 KIF3AQ9Y496 699 aa9.1□□□□□ -0.95
TMC1-202ENST00000340019 PRPF3O43395 683 aaKnown RBP9.09□□□□□ -0.95
TMC1-202ENST00000340019 CYTH3O43739 400 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 SMARCA1P28370 1054 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 ECE1P42892 770 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 GNAQP50148 359 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 ASPRV1Q53RT3 343 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 USP48Q86UV5 1035 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 CCDC82Q8N4S0 544 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.09□□□□□ -0.95
TMC1-202ENST00000340019 WRNIP1Q96S55 665 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 LZTS2Q9BRK4 669 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 WDR33Q9C0J8 1336 aaKnown RBP9.09□□□□□ -0.95
TMC1-202ENST00000340019 F5H6K3 240 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 DEXIO95424 95 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 GOLGA8HP0CJ92 632 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 KLRC3Q07444 240 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 ZNF543Q08ER8 600 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 PKN1Q16512 942 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 NOL9Q5SY16 702 aaKnown RBP9.09□□□□□ -0.95
TMC1-202ENST00000340019 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 SCYL3Q8IZE3 742 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 ACER1Q8TDN7 264 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 TNPO1Q92973 898 aaKnown RBP9.09□□□□□ -0.95
TMC1-202ENST00000340019 CDCA5Q96FF9 252 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 GLIS2Q9BZE0 524 aaPredicted RBP9.09□□□□□ -0.95
TMC1-202ENST00000340019 ARHGEF10LQ9HCE6 1279 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 MTMR7Q9Y216 660 aa9.09□□□□□ -0.95
TMC1-202ENST00000340019 KLRF2D3W0D1 207 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 ZSCAN22P10073 491 aaPredicted RBP9.08□□□□□ -0.96
TMC1-202ENST00000340019 DCAF4Q8WV16 495 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 ZKSCAN4Q969J2 545 aaPredicted RBP9.08□□□□□ -0.96
TMC1-202ENST00000340019 GMCL1Q96IK5 515 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 AIFM3Q96NN9 605 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 SPZ1Q9BXG8 430 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 NDUFB10O96000 172 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms