RNA–Protein interactions for RNA: ENST00000339530.8

LST1-203, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-203ENST00000339530 SPATA32Q96LK8 384 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
LST1-203ENST00000339530 SYNPO2Q9UMS6 1093 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 PALM3A6NDB9 673 aaPredicted RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 PLEKHA8P1O95397 391 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 YEATS4O95619 227 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 AKR1B1P15121 316 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 TNNI2P48788 182 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 FOSBP53539 338 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 TNFAIP1Q13829 316 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 FOXD4L6Q3SYB3 417 aaPredicted RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 ASPRV1Q53RT3 343 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 MYSM1Q5VVJ2 828 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 FOXD4L3Q6VB84 417 aaPredicted RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 TMEM179Q6ZVK1 233 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 ZSCAN29Q8IWY8 852 aaPredicted RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 GPT2Q8TD30 523 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 LEO1Q8WVC0 666 aaPredicted RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 SPZ1Q9BXG8 430 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 BRMS1Q9HCU9 246 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 SH3GLB2Q9NR46 395 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 ZBTB12Q9Y330 459 aaPredicted RBP12.81□□□□□ -0.36
LST1-203ENST00000339530 PCDHAC2Q9Y5I4 1007 aa12.81□□□□□ -0.36
LST1-203ENST00000339530 hCG_1984214I3L0E3 225 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
LST1-203ENST00000339530 SNHG28P0DPA3 235 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 SCG2P13521 617 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 CACNB3P54284 484 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 TCP10Q12799 353 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 PFKFB3Q16875 520 aaPredicted RBP12.8□□□□□ -0.36
LST1-203ENST00000339530 CERKLQ49MI3 558 aaPredicted RBP12.8□□□□□ -0.36
LST1-203ENST00000339530 SH3BP5LQ7L8J4 393 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 SRBD1Q8N5C6 995 aaKnown RBP12.8□□□□□ -0.36
LST1-203ENST00000339530 ZNF713Q8N859 430 aaPredicted RBP12.8□□□□□ -0.36
LST1-203ENST00000339530 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
LST1-203ENST00000339530 DNAJC18Q9H819 358 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 GDPD2Q9HCC8 539 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 MYOZ2Q9NPC6 264 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 RTEL1Q9NZ71 1219 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 NYAP2Q9P242 653 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 MAD2L2Q9UI95 211 aa12.8□□□□□ -0.36
LST1-203ENST00000339530 TBC1D12O60347 775 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 PPFIA3O75145 1194 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 NASPP49321 788 aaPredicted RBP12.79□□□□□ -0.36
LST1-203ENST00000339530 PKN1Q16512 942 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 ZFPM1Q8IX07 1006 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 CCDC148Q8NFR7 591 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 KCNG4Q8TDN1 519 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 AIFM3Q96NN9 605 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 CSRNP1Q96S65 589 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 KANSL2Q9H9L4 492 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
LST1-203ENST00000339530 GOLGA6L4A6NEF3 574 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 WNT10BO00744 389 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 LETM1O95202 739 aaPredicted RBP12.78□□□□□ -0.36
LST1-203ENST00000339530 CALML3P27482 149 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 GUCY1A2P33402 732 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 KRT2P35908 639 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 PRELPP51888 382 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 ZNF445P59923 1031 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 GPATCH4Q5T3I0 446 aaKnown RBP12.78□□□□□ -0.36
LST1-203ENST00000339530 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 GALNT17Q6IS24 598 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 CAVIN1Q6NZI2 390 aaKnown RBP12.78□□□□□ -0.36
LST1-203ENST00000339530 FAM173BQ6P4H8 233 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 DIS3L2Q8IYB7 885 aaKnown RBP12.78□□□□□ -0.36
LST1-203ENST00000339530 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
LST1-203ENST00000339530 MKL1Q969V6 931 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 USP28Q96RU2 1077 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 PHF20Q9BVI0 1012 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 MORC2Q9Y6X9 1032 aaPredicted RBP12.78□□□□□ -0.36
LST1-203ENST00000339530 DOCK1Q14185 1865 aa12.78□□□□□ -0.36
LST1-203ENST00000339530 CLRN2A0PK11 232 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 KIF28PB7ZC32 967 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 TCP10L2B9ZVM9 353 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 MPHOSPH10O00566 681 aaKnown RBP12.77□□□□□ -0.37
LST1-203ENST00000339530 GADD45BO75293 160 aaPredicted RBP12.77□□□□□ -0.37
LST1-203ENST00000339530 PDHBP11177 359 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 ABCB5Q2M3G0 1257 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 RILPL1Q5EBL4 403 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 CCDC183Q5T5S1 534 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
LST1-203ENST00000339530 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.37
LST1-203ENST00000339530 CCDC82Q8N4S0 544 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 DCAF4Q8WV16 495 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 VEZTQ9HBM0 779 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 CABP5Q9NP86 173 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
LST1-203ENST00000339530 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
LST1-203ENST00000339530 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms