RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ZSCAN10Q96SZ4 725 aaPredicted RBP18.68■□□□□ 0.58
LITAF-201ENST00000339430 ANAPC4Q9UJX5 808 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 PLEKHA8P1O95397 391 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 SERPINC1P01008 464 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 PRR29P0C7W0 189 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 BMP6P22004 513 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 AKAP17AQ02040 695 aaKnown RBP18.68■□□□□ 0.58
LITAF-201ENST00000339430 PDE4BQ07343 736 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 IFIT1BQ5T764 474 aaKnown RBP18.68■□□□□ 0.58
LITAF-201ENST00000339430 SPTY2D1Q68D10 685 aaPredicted RBP18.68■□□□□ 0.58
LITAF-201ENST00000339430 GRAMD1CQ8IYS0 662 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 SERTAD1Q9UHV2 236 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 PAXBP1Q9Y5B6 917 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 G3V3G9 751 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 LDHBP07195 334 aaKnown RBP18.67■□□□□ 0.58
LITAF-201ENST00000339430 PTPREP23469 700 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 PTGER2P43116 358 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 NAA30Q147X3 362 aaPredicted RBP18.67■□□□□ 0.58
LITAF-201ENST00000339430 GRIK5Q16478 980 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 DCAF8Q5TAQ9 597 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 CC2D2BQ6DHV5 1058 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 NYAP1Q6ZVC0 841 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 MTA3Q9BTC8 594 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 BAZ2BQ9UIF8 2168 aaKnown RBP18.67■□□□□ 0.58
LITAF-201ENST00000339430 SFPQP23246 707 aaKnown RBP eCLIP18.67■□□□□ 0.58
LITAF-201ENST00000339430 UBASH3AP57075 661 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 DZIP1Q86YF9 867 aaKnown RBP18.67■□□□□ 0.58
LITAF-201ENST00000339430 RTFDC1Q9BY42 306 aaPredicted RBP18.67■□□□□ 0.58
LITAF-201ENST00000339430 FANCLQ9NW38 375 aa18.67■□□□□ 0.58
LITAF-201ENST00000339430 SNED1Q8TER0 1413 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 GTF2IP78347 998 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 MDM2Q00987 491 aaPredicted RBP18.66■□□□□ 0.58
LITAF-201ENST00000339430 CFAP100Q494V2 611 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 CTR9Q6PD62 1173 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 ILDR2Q71H61 639 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 CCDC150Q8NCX0 1101 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 DBNDD1Q9H9R9 158 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 AATFQ9NY61 560 aaKnown RBP eCLIP18.66■□□□□ 0.58
LITAF-201ENST00000339430 PIM2Q9P1W9 311 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 USP17L12C9JPN9 530 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 USP17L21D6R901 530 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 POSTNQ15063 836 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 PKN1Q16512 942 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 SLC4A8Q2Y0W8 1093 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 EARS2Q5JPH6 523 aaKnown RBP18.66■□□□□ 0.58
LITAF-201ENST00000339430 MFSD14BQ5SR56 506 aa18.66■□□□□ 0.58
LITAF-201ENST00000339430 RNF26Q9BY78 433 aaPredicted RBP18.66■□□□□ 0.58
LITAF-201ENST00000339430 V9GY48 417 aaPredicted RBP18.66■□□□□ 0.58
LITAF-201ENST00000339430 NMT2O60551 498 aa18.65■□□□□ 0.58
LITAF-201ENST00000339430 NCBP1Q09161 790 aaKnown RBP18.65■□□□□ 0.58
LITAF-201ENST00000339430 CATIPQ7Z7H3 387 aa18.65■□□□□ 0.58
LITAF-201ENST00000339430 PDCL2Q8N4E4 241 aa18.65■□□□□ 0.58
LITAF-201ENST00000339430 CSRNP2Q9H175 543 aa18.65■□□□□ 0.58
LITAF-201ENST00000339430 MAN1B1Q9UKM7 699 aa18.65■□□□□ 0.58
LITAF-201ENST00000339430 KIAA1551Q9HCM1 1747 aa18.65■□□□□ 0.58
LITAF-201ENST00000339430 TMEM232C9JQI7 657 aa18.64■□□□□ 0.58
LITAF-201ENST00000339430 RCAN1P53805 252 aa18.64■□□□□ 0.58
LITAF-201ENST00000339430 PPP4R3BQ5MIZ7 849 aa18.64■□□□□ 0.58
LITAF-201ENST00000339430 E4F1Q66K89 784 aaPredicted RBP18.64■□□□□ 0.58
LITAF-201ENST00000339430 CCDC94Q9BW85 323 aaPredicted RBP18.64■□□□□ 0.58
LITAF-201ENST00000339430 CCDC88AQ3V6T2 1871 aa18.64■□□□□ 0.58
LITAF-201ENST00000339430 GOLGA8FQ08AF8 430 aa18.64■□□□□ 0.57
LITAF-201ENST00000339430 GOLGA8DPQ0D2H9 430 aa18.64■□□□□ 0.57
LITAF-201ENST00000339430 AOC3Q16853 763 aa18.64■□□□□ 0.57
LITAF-201ENST00000339430 CCDC93Q567U6 631 aa18.64■□□□□ 0.57
LITAF-201ENST00000339430 IQCA1Q86XH1 822 aa18.64■□□□□ 0.57
LITAF-201ENST00000339430 ANKRD7Q92527 254 aa18.64■□□□□ 0.57
LITAF-201ENST00000339430 SRPRBQ9Y5M8 271 aaKnown RBP18.64■□□□□ 0.57
LITAF-201ENST00000339430 DIXDC1Q155Q3 683 aa18.63■□□□□ 0.57
LITAF-201ENST00000339430 NOM1Q5C9Z4 860 aaKnown RBP18.63■□□□□ 0.57
LITAF-201ENST00000339430 FAM47AQ5JRC9 791 aa18.63■□□□□ 0.57
LITAF-201ENST00000339430 HOOK1Q9UJC3 728 aaKnown RBP18.63■□□□□ 0.57
LITAF-201ENST00000339430 FAM205AQ6ZU69 1335 aa18.63■□□□□ 0.57
LITAF-201ENST00000339430 FUT2Q10981 343 aa18.63■□□□□ 0.57
LITAF-201ENST00000339430 RTKN2Q8IZC4 609 aa18.63■□□□□ 0.57
LITAF-201ENST00000339430 TBC1D22AQ8WUA7 517 aa18.63■□□□□ 0.57
LITAF-201ENST00000339430 CEP131Q9UPN4 1083 aa18.63■□□□□ 0.57
LITAF-201ENST00000339430 CD2APQ9Y5K6 639 aa18.63■□□□□ 0.57
LITAF-201ENST00000339430 WNT7AO00755 349 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 CYP2D6P10635 497 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 XBP1P17861 261 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 KRT2P35908 639 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 TRMT44Q8IYL2 757 aaKnown RBP18.62■□□□□ 0.57
LITAF-201ENST00000339430 KCNQ5Q9NR82 932 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 FMR1Q06787 632 aaKnown RBP eCLIP18.62■□□□□ 0.57
LITAF-201ENST00000339430 TROAPQ12815 778 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 DALRD3Q5D0E6 543 aaKnown RBP18.62■□□□□ 0.57
LITAF-201ENST00000339430 PODNQ7Z5L7 613 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 SUPT20HQ8NEM7 779 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 SMARCE1Q969G3 411 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 PPP1R13BQ96KQ4 1090 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 PHF20Q9BVI0 1012 aa18.62■□□□□ 0.57
LITAF-201ENST00000339430 TRIM75PA6NK02 468 aa18.61■□□□□ 0.57
LITAF-201ENST00000339430 CBFA2T2O43439 604 aa18.61■□□□□ 0.57
LITAF-201ENST00000339430 GRIPAP1Q4V328 841 aa18.61■□□□□ 0.57
LITAF-201ENST00000339430 DHX58Q96C10 678 aa18.61■□□□□ 0.57
LITAF-201ENST00000339430 EPSTI1Q96J88 318 aa18.61■□□□□ 0.57
LITAF-201ENST00000339430 MXD3Q9BW11 206 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms