RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 C11orf49Q9H6J7 331 aa23.38■■□□□ 1.33
ITGA4-202ENST00000339307 ECHDC1Q9NTX5 307 aa23.38■■□□□ 1.33
ITGA4-202ENST00000339307 HOXC10Q9NYD6 342 aa23.38■■□□□ 1.33
ITGA4-202ENST00000339307 CEP290O15078 2479 aa23.38■■□□□ 1.33
ITGA4-202ENST00000339307 RAD21O60216 631 aa23.37■■□□□ 1.33
ITGA4-202ENST00000339307 CCND3P30281 292 aaPredicted RBP23.37■■□□□ 1.33
ITGA4-202ENST00000339307 CDK8P49336 464 aa23.37■■□□□ 1.33
ITGA4-202ENST00000339307 ICA1Q05084 483 aa23.37■■□□□ 1.33
ITGA4-202ENST00000339307 PLS1Q14651 629 aa23.37■■□□□ 1.33
ITGA4-202ENST00000339307 MAP3K21Q5TCX8 1036 aa23.37■■□□□ 1.33
ITGA4-202ENST00000339307 C7orf61Q8IZ16 206 aa23.37■■□□□ 1.33
ITGA4-202ENST00000339307 PUS7LQ9H0K6 701 aaKnown RBP23.37■■□□□ 1.33
ITGA4-202ENST00000339307 BAZ2AQ9UIF9 1905 aaKnown RBP23.37■■□□□ 1.33
ITGA4-202ENST00000339307 SLC15A5A6NIM6 579 aa23.36■■□□□ 1.33
ITGA4-202ENST00000339307 SMIM22K7EJ46 135 aa23.36■■□□□ 1.33
ITGA4-202ENST00000339307 PTPREP23469 700 aa23.36■■□□□ 1.33
ITGA4-202ENST00000339307 C12orf60Q5U649 245 aa23.36■■□□□ 1.33
ITGA4-202ENST00000339307 MFSD14CQ5VZR4 134 aa23.36■■□□□ 1.33
ITGA4-202ENST00000339307 STK11IPQ8N1F8 1099 aa23.36■■□□□ 1.33
ITGA4-202ENST00000339307 SH2D4AQ9H788 454 aa23.36■■□□□ 1.33
ITGA4-202ENST00000339307 OGDHLQ9ULD0 1010 aa23.36■■□□□ 1.33
ITGA4-202ENST00000339307 FLOT1O75955 427 aa23.35■■□□□ 1.33
ITGA4-202ENST00000339307 CNGA1P29973 690 aa23.35■■□□□ 1.33
ITGA4-202ENST00000339307 TSHZ3Q63HK5 1081 aa23.35■■□□□ 1.33
ITGA4-202ENST00000339307 LBX2Q6XYB7 198 aa23.35■■□□□ 1.33
ITGA4-202ENST00000339307 CCDC17Q96LX7 622 aa23.35■■□□□ 1.33
ITGA4-202ENST00000339307 MYH8P13535 1937 aa23.35■■□□□ 1.33
ITGA4-202ENST00000339307 KIAA1755Q5JYT7 1200 aa23.34■■□□□ 1.33
ITGA4-202ENST00000339307 DPP9Q86TI2 863 aa23.34■■□□□ 1.33
ITGA4-202ENST00000339307 CTR9Q6PD62 1173 aa23.33■■□□□ 1.33
ITGA4-202ENST00000339307 C16orf86Q6ZW13 317 aa23.33■■□□□ 1.33
ITGA4-202ENST00000339307 DCTPP1Q9H773 170 aa23.33■■□□□ 1.33
ITGA4-202ENST00000339307 FLRT1Q9NZU1 646 aa23.33■■□□□ 1.33
ITGA4-202ENST00000339307 STAP2Q9UGK3 403 aa23.33■■□□□ 1.33
ITGA4-202ENST00000339307 ZMYND8Q9ULU4 1186 aaPredicted RBP23.33■■□□□ 1.33
ITGA4-202ENST00000339307 LPAR1Q92633 364 aa23.33■■□□□ 1.32
ITGA4-202ENST00000339307 MOV10L1Q9BXT6 1211 aaKnown RBP23.33■■□□□ 1.32
ITGA4-202ENST00000339307 TMX2Q9Y320 296 aa23.33■■□□□ 1.32
ITGA4-202ENST00000339307 MYH7P12883 1935 aa23.33■■□□□ 1.32
ITGA4-202ENST00000339307 MINDY4BA8MYZ0 360 aa23.32■■□□□ 1.32
ITGA4-202ENST00000339307 GRB14Q14449 540 aa23.32■■□□□ 1.32
ITGA4-202ENST00000339307 NCAPG2Q86XI2 1143 aa23.32■■□□□ 1.32
ITGA4-202ENST00000339307 SIAH1Q8IUQ4 282 aa23.32■■□□□ 1.32
ITGA4-202ENST00000339307 NPLOC4Q8TAT6 608 aa23.32■■□□□ 1.32
ITGA4-202ENST00000339307 SPATC1LQ9H0A9 340 aa23.32■■□□□ 1.32
ITGA4-202ENST00000339307 VCPKMTQ9H867 229 aa23.32■■□□□ 1.32
ITGA4-202ENST00000339307 ARPP21Q9UBL0 812 aaPredicted RBP23.32■■□□□ 1.32
ITGA4-202ENST00000339307 EEF2P13639 858 aaKnown RBP23.31■■□□□ 1.32
ITGA4-202ENST00000339307 SYN1P17600 705 aa23.31■■□□□ 1.32
ITGA4-202ENST00000339307 ERCC3P19447 782 aa23.31■■□□□ 1.32
ITGA4-202ENST00000339307 DSG3P32926 999 aa23.31■■□□□ 1.32
ITGA4-202ENST00000339307 MNX1P50219 401 aaPredicted RBP23.31■■□□□ 1.32
ITGA4-202ENST00000339307 KBTBD3Q8NAB2 608 aa23.31■■□□□ 1.32
ITGA4-202ENST00000339307 ATG4CQ96DT6 458 aa23.31■■□□□ 1.32
ITGA4-202ENST00000339307 KANSL2Q9H9L4 492 aa23.31■■□□□ 1.32
ITGA4-202ENST00000339307 APPP05067 770 aa23.3■■□□□ 1.32
ITGA4-202ENST00000339307 CYP2C19P33261 490 aa23.3■■□□□ 1.32
ITGA4-202ENST00000339307 LHX8Q68G74 356 aa23.3■■□□□ 1.32
ITGA4-202ENST00000339307 MB21D1Q8N884 522 aa23.3■■□□□ 1.32
ITGA4-202ENST00000339307 STRBPQ96SI9 672 aaKnown RBP23.3■■□□□ 1.32
ITGA4-202ENST00000339307 MKNK2Q9HBH9 465 aa23.3■■□□□ 1.32
ITGA4-202ENST00000339307 TRIOBPQ9H2D6 2365 aa23.29■■□□□ 1.32
ITGA4-202ENST00000339307 RNF113AO15541 343 aaKnown RBP23.29■■□□□ 1.32
ITGA4-202ENST00000339307 ADORA2AP29274 412 aa23.29■■□□□ 1.32
ITGA4-202ENST00000339307 GOPCQ9HD26 462 aa23.29■■□□□ 1.32
ITGA4-202ENST00000339307 WDR46O15213 610 aaKnown RBP23.28■■□□□ 1.32
ITGA4-202ENST00000339307 STRNO43815 780 aa23.28■■□□□ 1.32
ITGA4-202ENST00000339307 APPBP2Q92624 585 aa23.28■■□□□ 1.32
ITGA4-202ENST00000339307 TDO2P48775 406 aa23.27■■□□□ 1.32
ITGA4-202ENST00000339307 OSBP2Q969R2 916 aa23.27■■□□□ 1.32
ITGA4-202ENST00000339307 ALPK3Q96L96 1907 aa23.27■■□□□ 1.32
ITGA4-202ENST00000339307 SLC5A4Q9NY91 659 aa23.27■■□□□ 1.32
ITGA4-202ENST00000339307 DDX20Q9UHI6 824 aaKnown RBP23.27■■□□□ 1.32
ITGA4-202ENST00000339307 PFASO15067 1338 aa23.26■■□□□ 1.31
ITGA4-202ENST00000339307 MYCNP04198 464 aaPredicted RBP23.26■■□□□ 1.31
ITGA4-202ENST00000339307 HOXC6P09630 235 aa23.26■■□□□ 1.31
ITGA4-202ENST00000339307 SHCBP1Q8NEM2 672 aa23.26■■□□□ 1.31
ITGA4-202ENST00000339307 PRO3102Q9H379 93 aa23.26■■□□□ 1.31
ITGA4-202ENST00000339307 MROH8Q9H579 483 aa23.26■■□□□ 1.31
ITGA4-202ENST00000339307 GSG1L2A8MUP6 293 aa23.25■■□□□ 1.31
ITGA4-202ENST00000339307 GPAA1O43292 621 aa23.25■■□□□ 1.31
ITGA4-202ENST00000339307 ZFYP08048 801 aaPredicted RBP23.25■■□□□ 1.31
ITGA4-202ENST00000339307 LRRFIP1Q32MZ4 808 aaKnown RBP23.25■■□□□ 1.31
ITGA4-202ENST00000339307 SENP6Q9GZR1 1112 aaPredicted RBP23.25■■□□□ 1.31
ITGA4-202ENST00000339307 FBXO28Q9NVF7 368 aa23.25■■□□□ 1.31
ITGA4-202ENST00000339307 ZBTB47Q9UFB7 747 aaPredicted RBP23.25■■□□□ 1.31
ITGA4-202ENST00000339307 ERC2O15083 957 aa23.25■■□□□ 1.31
ITGA4-202ENST00000339307 FAM83BQ5T0W9 1011 aa23.25■■□□□ 1.31
ITGA4-202ENST00000339307 PCDHB15Q9Y5E8 787 aa23.25■■□□□ 1.31
ITGA4-202ENST00000339307 M0R2C6 588 aa23.24■■□□□ 1.31
ITGA4-202ENST00000339307 MSCO60682 206 aa23.24■■□□□ 1.31
ITGA4-202ENST00000339307 COBLO75128 1261 aa23.24■■□□□ 1.31
ITGA4-202ENST00000339307 FCER1AP12319 257 aa23.24■■□□□ 1.31
ITGA4-202ENST00000339307 TMEM132BQ14DG7 1078 aa23.24■■□□□ 1.31
ITGA4-202ENST00000339307 SBK1Q52WX2 424 aa23.24■■□□□ 1.31
ITGA4-202ENST00000339307 GIMAP6Q6P9H5 292 aa23.24■■□□□ 1.31
ITGA4-202ENST00000339307 GNAT2P19087 354 aa23.23■■□□□ 1.31
ITGA4-202ENST00000339307 RASA1P20936 1047 aa23.23■■□□□ 1.31
ITGA4-202ENST00000339307 LRRC26Q2I0M4 334 aa23.23■■□□□ 1.31
ITGA4-202ENST00000339307 ANO1Q5XXA6 986 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms