RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 ARMCX5Q6P1M9 558 aa14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 FILIP1Q7Z7B0 1213 aa14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 NLGN1Q8N2Q7 840 aa14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SPATA20Q8TB22 786 aa14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TSC1Q92574 1164 aa14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SNED1Q8TER0 1413 aa14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TRIM75PA6NK02 468 aa14.87□□□□□ -0.03
CDK5RAP1-201ENST00000339269 IGSF3O75054 1194 aa14.87□□□□□ -0.03
CDK5RAP1-201ENST00000339269 LMOD1P29536 600 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP1-201ENST00000339269 POSTNQ15063 836 aa14.87□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
CDK5RAP1-201ENST00000339269 INTS13Q9NVM9 706 aa14.87□□□□□ -0.03
CDK5RAP1-201ENST00000339269 BAZ2BQ9UIF8 2168 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP1-201ENST00000339269 NAV1Q8NEY1 1877 aa14.87□□□□□ -0.03
CDK5RAP1-201ENST00000339269 IL1R1P14778 569 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 PLCD1P51178 756 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 FANCCQ00597 558 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 AKAP17AQ02040 695 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 MYL5Q02045 173 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 FMR1Q06787 632 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 MORC3Q14149 939 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 PFKFB3Q16875 520 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SMTNL1A8MU46 457 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 NEMFO60524 1076 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SERPINB2P05120 415 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 MMP10P09238 476 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SCG2P13521 617 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TFAP4Q01664 338 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TYW1BQ6NUM6 668 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ZNF804AQ7Z570 1209 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 STAG2Q8N3U4 1231 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 EPSTI1Q96J88 318 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 CD209Q9NNX6 404 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 KCND1Q9NSA2 647 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 FAM13BQ9NYF5 915 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 IMPACTQ9P2X3 320 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 CDK5RAP2Q96SN8 1893 aa14.86□□□□□ -0.03
CDK5RAP1-201ENST00000339269 FAM205AQ6ZU69 1335 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 KLRG2A4D1S0 409 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 USP17L3A6NCW0 530 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 USP17L4A6NCW7 530 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TSPY2A6NKD2 308 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SMC2O95347 1197 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SKILP12757 684 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ZRSR1Q15695 479 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 IL17AQ16552 155 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 USP17L1Q7RTZ2 530 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ZNF710Q8N1W2 664 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 CTCFLQ8NI51 663 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 POLLQ9UGP5 575 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 CEP131Q9UPN4 1083 aa14.85□□□□□ -0.03
CDK5RAP1-201ENST00000339269 POLRMTO00411 1230 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 NPHP1O15259 732 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 UFL1O94874 794 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 XBP1P17861 261 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 RASA1P20936 1047 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 HOXA10P31260 410 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ATP2C1P98194 919 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 GRM4Q14833 912 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 NYAP1Q6ZVC0 841 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TMC6Q7Z403 805 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 DGKHQ86XP1 1220 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TGFBRAP1Q8WUH2 860 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 C16orf45Q96MC5 204 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TCP11L1Q9NUJ3 509 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 MAD2L2Q9UI95 211 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 M0R2N6 131 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ZNF18P17022 549 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 USP5P45974 858 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 GSDMDP57764 484 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 RHBDL3P58872 404 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ZNF174Q15697 407 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 TTC38Q5R3I4 469 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 RASGRP2Q7LDG7 609 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 PDILTQ8N807 584 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SYMPKQ92797 1274 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 FANCLQ9NW38 375 aa14.84□□□□□ -0.03
CDK5RAP1-201ENST00000339269 GPR75-ASB3A0A0A6YYF3 556 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TMEM232C9JQI7 657 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CYTH3O43739 400 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 RRP9O43818 475 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 ATP2B4P23634 1241 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 MAPKAPK5Q8IW41 473 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 C4orf32Q8N8J7 132 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PNMA1Q8ND90 353 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 RPGRQ92834 1020 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 SAP30BPQ9UHR5 308 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PARP3Q9Y6F1 533 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 GAKO14976 1311 aa14.83□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CASP1P29466 404 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 BTDP43251 543 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 GSTO1P78417 241 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 E2F4Q16254 413 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 GGA1Q9UJY5 639 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 GOLGB1Q14789 3259 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms