RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RASGRP4Q8TDF6 673 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 ZNF512BQ96KM6 892 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-202ENST00000338368 CCDC42Q96M95 316 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 CRACR2AQ9BSW2 395 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 PYCARDQ9ULZ3 195 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 ADGRB2O60241 1585 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 TMCO5BA8MYB1 307 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 RIOK3O14730 519 aaKnown RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 NTSR2O95665 410 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CASP7P55210 303 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 SRRTQ9BXP5 876 aaKnown RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 DCP1AQ9NPI6 582 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 PPIP5K2O43314 1243 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 TRAPPC10P48553 1259 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CETN1Q12798 172 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 BMS1Q14692 1282 aaKnown RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 RC3H1Q5TC82 1133 aaKnown RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 REXO1Q8N1G1 1221 aaKnown RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 SYMPKQ92797 1274 aaKnown RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CCDC17Q96LX7 622 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 GPR101Q96P66 508 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 DBNDD1Q9H9R9 158 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 SYNRGQ9UMZ2 1314 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CD209Q9NNX6 404 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 KDM6AO15550 1401 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 FCHSD1Q86WN1 690 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 PDLIM2Q96JY6 352 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 WDR19Q8NEZ3 1342 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CTAGE15A4D2H0 777 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CTAGE8P0CG41 777 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 LONP1P36776 959 aaKnown RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CTAGE6Q86UF2 777 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CTAGE4Q8IX94 777 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CNKSR1Q969H4 720 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 A0A0G2JLW4 131 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 KRT9P35527 623 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 TERF1P54274 439 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 CNNM4Q6P4Q7 775 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 NEK8Q86SG6 692 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 FRMPD2Q68DX3 1309 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 PPEF1O14829 653 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-202ENST00000338368 KIF5AQ12840 1032 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 ARHGEF10LQ9HCE6 1279 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 DCCP43146 1447 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 PNPLA7Q6ZV29 1317 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 MATR3P43243 847 aaKnown RBP eCLIP7.07□□□□□ -1.281e-6■■■■■ 30.6
PRKDC-202ENST00000338368 GALNT17Q6IS24 598 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 GSDMAQ96QA5 445 aa7.07□□□□□ -1.28
PRKDC-202ENST00000338368 ANTXR2P58335 489 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 ZNF710Q8N1W2 664 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 TAB2Q9NYJ8 693 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 PCDHB6Q9Y5E3 794 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 SPDYE4A6NLX3 237 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 IKBKBO14920 756 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 CYP2D6P10635 497 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 POLD1P28340 1107 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 PCDHA4Q9UN74 947 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 AFF2P51816 1311 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 PLEKHA8P1O95397 391 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 NT5C2P49902 561 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 CERKLQ49MI3 558 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-202ENST00000338368 FMR1NBQ8N0W7 255 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-202ENST00000338368 PSTPIP2Q9H939 334 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 SLFN14P0C7P3 912 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 ADRA2BP18089 450 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 HS2ST1Q7LGA3 356 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 STK36Q9NRP7 1315 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 FAM13AO94988 1023 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 CFBP00751 764 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 RDXP35241 583 aaKnown RBP7.06□□□□□ -1.28
PRKDC-202ENST00000338368 CALCRLQ16602 461 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 ZNF569Q5MCW4 686 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 MYRIPQ8NFW9 859 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 ALS2CR12Q96Q35 445 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 SERPINB13Q9UIV8 391 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 TRAF5O00463 557 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 PTPREP23469 700 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 TECP42680 631 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 VPS72Q15906 364 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 SPATA1Q5VX52 437 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 GTPBP6O43824 516 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-202ENST00000338368 CDC25AP30304 524 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 BAG6P46379 1132 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 HERC4Q5GLZ8 1057 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-202ENST00000338368 GOLPH3LQ9H4A5 285 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 USP17L3A6NCW0 530 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 USP17L4A6NCW7 530 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 KIF28PB7ZC32 967 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 NOP2P46087 812 aaKnown RBP7.06□□□□□ -1.28
PRKDC-202ENST00000338368 NFIXQ14938 502 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 USP17L1Q7RTZ2 530 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 POTEB2H3BUK9 544 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 LY9Q9HBG7 655 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 ERCC5P28715 1186 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-202ENST00000338368 BARGINQ6ZT62 677 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 TMTC1Q8IUR5 882 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 PCDHA12Q9UN75 941 aa7.06□□□□□ -1.28
PRKDC-202ENST00000338368 ERLIN2O94905 339 aa7.05□□□□□ -1.28
PRKDC-202ENST00000338368 ICA1Q05084 483 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms