RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TSGA10IPQ3SY00 556 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 FOXP4Q8IVH2 680 aaPredicted RBP9.28□□□□□ -0.92
HPS4-201ENST00000336873 PNMA1Q8ND90 353 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 ENGASEQ8NFI3 743 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 GJA10Q969M2 543 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 SLC39A2Q9NP94 309 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 SPTLC3Q9NUV7 552 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 LRRC37A3O60309 1634 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 A0A1W2PQ27 194 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 A0A1W2PQ64 194 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 A0A1W2PQD8 194 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 UFL1O94874 794 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 CASP7P55210 303 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 LRRC41Q15345 812 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 TBC1D10BQ4KMP7 808 aaPredicted RBP9.28□□□□□ -0.92
HPS4-201ENST00000336873 ATL3Q6DD88 541 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 SLC51AQ86UW1 340 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 NELFBQ8WX92 580 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 CCNL1Q9UK58 526 aaPredicted RBP9.28□□□□□ -0.92
HPS4-201ENST00000336873 MROH5Q6ZUA9 1318 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 ARID4AP29374 1257 aaPredicted RBP9.28□□□□□ -0.92
HPS4-201ENST00000336873 CXCR5P32302 372 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 ZNF76P36508 570 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 MAEAQ7L5Y9 396 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 ADGRA1Q86SQ6 560 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 STAG2Q8N3U4 1231 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 FNBP4Q8N3X1 1017 aaPredicted RBP9.28□□□□□ -0.92
HPS4-201ENST00000336873 CSGALNACT2Q8N6G5 542 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 ENAHQ8N8S7 591 aaPredicted RBP9.28□□□□□ -0.92
HPS4-201ENST00000336873 IGDCC4Q8TDY8 1250 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 EXOC1Q9NV70 894 aa9.28□□□□□ -0.92
HPS4-201ENST00000336873 RTCBQ9Y3I0 505 aaKnown RBP9.28□□□□□ -0.92
HPS4-201ENST00000336873 SRGAP2O75044 1071 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 SLC16A2P36021 539 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 CLCN6P51797 869 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 CACNB3P54284 484 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 RBM6P78332 1123 aaKnown RBP9.27□□□□□ -0.92
HPS4-201ENST00000336873 CUL4BQ13620 913 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 LLGL1Q15334 1064 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 SPA17Q15506 151 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 CCDC40Q4G0X9 1142 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 TEX11Q8IYF3 940 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 GPR108Q9NPR9 543 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 LUC7L2Q9Y383 392 aaKnown RBP9.27□□□□□ -0.92
HPS4-201ENST00000336873 FMN2Q9NZ56 1722 aa9.27□□□□□ -0.92
HPS4-201ENST00000336873 A0A0U1RQJ8 604 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 ARHGAP6O43182 974 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 BAG3O95817 575 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 GNAT2P19087 354 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 NOP2P46087 812 aaKnown RBP9.27□□□□□ -0.93
HPS4-201ENST00000336873 MECOMQ03112 1051 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 DOK7Q18PE1 504 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 EARS2Q5JPH6 523 aaKnown RBP9.27□□□□□ -0.93
HPS4-201ENST00000336873 CCDC70Q6NSX1 233 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 ATRIPQ8WXE1 791 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 UTYO14607 1347 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 CTAGE9A4FU28 777 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 IFNAR1P17181 557 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 SNAP25P60880 206 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 GTF2IP78347 998 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 PRPF4BQ13523 1007 aaKnown RBP9.27□□□□□ -0.93
HPS4-201ENST00000336873 ZFYVE27Q5T4F4 411 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 KANK3Q6NY19 840 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 RGS22Q8NE09 1264 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 SLC4A9Q96Q91 983 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 TNS3Q68CZ2 1445 aa9.27□□□□□ -0.93
HPS4-201ENST00000336873 CCDC66A2RUB6 948 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 CTAGE15A4D2H0 777 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 PSMA7O14818 248 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 CTAGE8P0CG41 777 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 CHMP4BP1P59074 171 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 MSL1Q68DK7 614 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 TTC19Q6DKK2 380 aaPredicted RBP9.26□□□□□ -0.93
HPS4-201ENST00000336873 LEKR1Q6ZMV7 388 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 CTAGE6Q86UF2 777 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 CTAGE4Q8IX94 777 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 MLKLQ8NB16 471 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 COA7Q96BR5 231 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 BCCIPQ9P287 314 aaKnown RBP eCLIP9.26□□□□□ -0.93
HPS4-201ENST00000336873 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
HPS4-201ENST00000336873 SLURP2P0DP57 97 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 PAK1Q13153 545 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 USH1GQ495M9 461 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 NCAPH2Q6IBW4 605 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 TXNRD3Q86VQ6 643 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 FCHSD1Q86WN1 690 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 SLC35F6Q8N357 371 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 SUGCTQ9HAC7 445 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 ITSN1Q15811 1721 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 TMCO5BA8MYB1 307 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 ECM2O94769 699 aaPredicted RBP9.26□□□□□ -0.93
HPS4-201ENST00000336873 USP8P40818 1118 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 PTF1AQ7RTS3 328 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 C10orf67Q8IYJ2 551 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 CCDC42Q96M95 316 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 TRIM10Q9UDY6 481 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 RSPH14Q9UHP6 348 aa9.26□□□□□ -0.93
HPS4-201ENST00000336873 UBR1Q8IWV7 1749 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms