RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 NLGN1Q8N2Q7 840 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 KRI1Q8N9T8 703 aaKnown RBP14.44□□□□□ -0.1
LIMK1-201ENST00000336180 CEP95Q96GE4 821 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 USP40Q9NVE5 1235 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 ATP6V0A2Q9Y487 856 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 FAM205AQ6ZU69 1335 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 UBR3Q6ZT12 1888 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 CYTH3O43739 400 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 ORC4O43929 436 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 ATP1A3P13637 1013 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 ZNF75DP51815 510 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 GSTO1P78417 241 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 METTL16Q86W50 562 aaKnown RBP14.44□□□□□ -0.1
LIMK1-201ENST00000336180 RNF26Q9BY78 433 aaPredicted RBP14.44□□□□□ -0.1
LIMK1-201ENST00000336180 A0A087X0B3 334 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 A0A1W2PQ27 194 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 A0A1W2PQ64 194 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 A0A1W2PQD8 194 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 SMC2O95347 1197 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 LDHCP07864 332 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 IL1R1P14778 569 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 GOLGA8FQ08AF8 430 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 GOLGA8DPQ0D2H9 430 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 GPCPD1Q9NPB8 672 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 CLIP2Q9UDT6 1046 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 STK36Q9NRP7 1315 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 AOC3Q16853 763 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 ATL3Q6DD88 541 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 FBXO2Q9UK22 296 aaPredicted RBP14.43□□□□□ -0.1
LIMK1-201ENST00000336180 NPY5RQ15761 445 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 TEX2Q8IWB9 1127 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 ZSCAN29Q8IWY8 852 aaPredicted RBP14.43□□□□□ -0.1
LIMK1-201ENST00000336180 SMYD4Q8IYR2 804 aaPredicted RBP14.43□□□□□ -0.1
LIMK1-201ENST00000336180 CEP57L1Q8IYX8 460 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 CNPY4Q8N129 248 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 TSC1Q92574 1164 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 PHF20Q9BVI0 1012 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 ANO10Q9NW15 660 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 PCDHA5Q9Y5H7 936 aa14.43□□□□□ -0.1
LIMK1-201ENST00000336180 USP17L5A8MUK1 530 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 PRPF3O43395 683 aaKnown RBP14.42□□□□□ -0.1
LIMK1-201ENST00000336180 SCG2P13521 617 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 AKR1B1P15121 316 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 HOXA10P31260 410 aaPredicted RBP14.42□□□□□ -0.1
LIMK1-201ENST00000336180 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 PPP1R1BQ9UD71 204 aaPredicted RBP14.42□□□□□ -0.1
LIMK1-201ENST00000336180 GPR75-ASB3A0A0A6YYF3 556 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 PP2D1A8MPX8 630 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 TAL1P17542 331 aaPredicted RBP14.42□□□□□ -0.1
LIMK1-201ENST00000336180 SBK1Q52WX2 424 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 KLHL10Q6JEL2 608 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 SP8Q8IXZ3 490 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 ARID3AQ99856 593 aa14.42□□□□□ -0.1
LIMK1-201ENST00000336180 TRIM75PA6NK02 468 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 C21orf2O43822 256 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 FGRP09769 529 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 SLC16A2P36021 539 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 RESP18Q5W5W9 173 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 MAD2L2Q9UI95 211 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 ECM29Q5VYK3 1845 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 XBP1P17861 261 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 PTGDRQ13258 359 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 JMYQ8N9B5 988 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 BLZF1Q9H2G9 400 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 FOXP1Q9H334 677 aaPredicted RBP14.41□□□□□ -0.1
LIMK1-201ENST00000336180 TIAM2Q8IVF5 1701 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 KLRF2D3W0D1 207 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 CTAGE5O15320 804 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 NPR1P16066 1061 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 STX17P56962 302 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 SNAP25P60880 206 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 KIAA2012Q0VF49 1180 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 CREBRFQ8IUR6 639 aa14.41□□□□□ -0.1
LIMK1-201ENST00000336180 DDAH1O94760 285 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 INF2Q27J81 1249 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 RILPL1Q5EBL4 403 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 WWC2Q6AWC2 1192 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 TMX4Q9H1E5 349 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-201ENST00000336180 IFNKQ9P0W0 207 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 MYH15Q9Y2K3 1946 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 RGL2O15211 777 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 CUTAO60888 179 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 BMP6P22004 513 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 TTC38Q5R3I4 469 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 KRBA2Q6ZNG9 492 aa14.4□□□□□ -0.1
LIMK1-201ENST00000336180 SYMPKQ92797 1274 aaKnown RBP14.4□□□□□ -0.1
LIMK1-201ENST00000336180 RBM28Q9NW13 759 aaKnown RBP14.4□□□□□ -0.1
LIMK1-201ENST00000336180 ZNF772Q68DY9 489 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-201ENST00000336180 COA7Q96BR5 231 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 PPP6R2O75170 966 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 PPP4CP60510 307 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 TTBK2Q6IQ55 1244 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
LIMK1-201ENST00000336180 PIGSQ96S52 555 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 RGS17Q9UGC6 210 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-201ENST00000336180 KCNG1Q9UIX4 513 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 MAPK8IP1Q9UQF2 711 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 HPSEQ9Y251 543 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 PTPREP23469 700 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms