RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 MCM6Q14566 821 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 TRMT44Q8IYL2 757 aaKnown RBP15.79■□□□□ 0.12
SF1-202ENST00000334944 GOLGA6L1Q8N7Z2 621 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 SERTAD1Q9UHV2 236 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 HSD3B7Q9H2F3 369 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 ECM29Q5VYK3 1845 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 WNK3Q9BYP7 1800 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 TADA3O75528 432 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 USP17L8P0C7I0 530 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 WASF1Q92558 559 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 ARHGEF1Q92888 912 aaKnown RBP15.79■□□□□ 0.12
SF1-202ENST00000334944 ANKIB1Q9P2G1 1089 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 DOCK2Q92608 1830 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 CUTAO60888 179 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
SF1-202ENST00000334944 DIXDC1Q155Q3 683 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 GRIK5Q16478 980 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 PKN1Q16512 942 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 STAMQ92783 540 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 CSRNP2Q9H175 543 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 FANCLQ9NW38 375 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 FBXO2Q9UK22 296 aaPredicted RBP15.78■□□□□ 0.12
SF1-202ENST00000334944 ARAP2Q8WZ64 1704 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 EIF3CLB5ME19 914 aaKnown RBP15.78■□□□□ 0.12
SF1-202ENST00000334944 ACTN2P35609 894 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 FANCCQ00597 558 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 NFIXQ14938 502 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 WWC2Q6AWC2 1192 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 EPSTI1Q96J88 318 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 EIF3CQ99613 913 aaKnown RBP15.78■□□□□ 0.12
SF1-202ENST00000334944 STK36Q9NRP7 1315 aa15.78■□□□□ 0.12
SF1-202ENST00000334944 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 TMEM232C9JQI7 657 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 SERPINC1P01008 464 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 ZNF174Q15697 407 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 FBXO33Q7Z6M2 555 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 CATIPQ7Z7H3 387 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 IQCA1Q86XH1 822 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 DYNLL2Q96FJ2 89 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 DCP1AQ9NPI6 582 aaPredicted RBP15.77■□□□□ 0.12
SF1-202ENST00000334944 NARFQ9UHQ1 456 aa15.77■□□□□ 0.12
SF1-202ENST00000334944 COL22A1Q8NFW1 1626 aaPredicted RBP15.77■□□□□ 0.12
SF1-202ENST00000334944 COBLO75128 1261 aa15.77■□□□□ 0.11
SF1-202ENST00000334944 AFMP43652 599 aa15.77■□□□□ 0.11
SF1-202ENST00000334944 MMP14P50281 582 aa15.77■□□□□ 0.11
SF1-202ENST00000334944 LEKR1Q6ZMV7 388 aa15.77■□□□□ 0.11
SF1-202ENST00000334944 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.77■□□□□ 0.11
SF1-202ENST00000334944 MCM9Q9NXL9 1143 aa15.77■□□□□ 0.11
SF1-202ENST00000334944 NRAPQ86VF7 1730 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 SFPQP23246 707 aaKnown RBP eCLIP15.76■□□□□ 0.11
SF1-202ENST00000334944 ETF1P62495 437 aaKnown RBP15.76■□□□□ 0.11
SF1-202ENST00000334944 CFAP100Q494V2 611 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 TMTC2Q8N394 836 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 DHX58Q96C10 678 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 FAM212AQ96EL1 285 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 UBXN6Q9BZV1 441 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 MYH13Q9UKX3 1938 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 KIF2AO00139 706 aaPredicted RBP15.76■□□□□ 0.11
SF1-202ENST00000334944 TPTE2Q6XPS3 522 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 BANK1Q8NDB2 785 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 TUBE1Q9UJT0 475 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 RTCBQ9Y3I0 505 aaKnown RBP15.76■□□□□ 0.11
SF1-202ENST00000334944 TROAPQ12815 778 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 DZIP1Q86YF9 867 aaKnown RBP15.76■□□□□ 0.11
SF1-202ENST00000334944 FOXP1Q9H334 677 aaPredicted RBP15.76■□□□□ 0.11
SF1-202ENST00000334944 PDE11AQ9HCR9 933 aa15.76■□□□□ 0.11
SF1-202ENST00000334944 A0A087X0B3 334 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 UBAP1LF5GYI3 381 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 RILPL1Q5EBL4 403 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 SRBD1Q8N5C6 995 aaKnown RBP15.75■□□□□ 0.11
SF1-202ENST00000334944 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 PARD6BQ9BYG5 372 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 ARFGAP3Q9NP61 516 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 TSPY2A6NKD2 308 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 RPS6KA4O75676 772 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 PTPREP23469 700 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 UBASH3AP57075 661 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 FUT2Q10981 343 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 DNAJC21Q5F1R6 531 aaKnown RBP15.75■□□□□ 0.11
SF1-202ENST00000334944 RASGRP2Q7LDG7 609 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 FUT8Q9BYC5 575 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 DEF6Q9H4E7 631 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 CACNA1SQ13698 1873 aa15.75■□□□□ 0.11
SF1-202ENST00000334944 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.111e-11■□□□□ 9.6
SF1-202ENST00000334944 POSTNQ15063 836 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 KLHL10Q6JEL2 608 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 MYL5Q02045 173 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 OLFM4Q6UX06 510 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 SMYD4Q8IYR2 804 aaPredicted RBP15.74■□□□□ 0.11
SF1-202ENST00000334944 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 SAP30BPQ9UHR5 308 aaKnown RBP15.74■□□□□ 0.11
SF1-202ENST00000334944 MAN1B1Q9UKM7 699 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 BCORQ6W2J9 1755 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 CDC25AP30304 524 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 TM4SF1P30408 202 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 RFC4P35249 363 aa15.74■□□□□ 0.11
SF1-202ENST00000334944 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.113e-7■■□□□ 13
SF1-202ENST00000334944 CRNKL1Q9BZJ0 848 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms