RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 DCP1AQ9NPI6 582 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3B-201ENST00000333467 ANO2Q9NQ90 1003 aa13.05□□□□□ -0.32
APOBEC3B-201ENST00000333467 GINM1Q9NU53 330 aa13.05□□□□□ -0.32
APOBEC3B-201ENST00000333467 MCM9Q9NXL9 1143 aa13.05□□□□□ -0.32
APOBEC3B-201ENST00000333467 MYPNQ86TC9 1320 aa13.05□□□□□ -0.32
APOBEC3B-201ENST00000333467 RAD50Q92878 1312 aa13.05□□□□□ -0.32
APOBEC3B-201ENST00000333467 PDE4DIPQ5VU43 2346 aa13.05□□□□□ -0.32
APOBEC3B-201ENST00000333467 RLFQ13129 1914 aa13.05□□□□□ -0.32
APOBEC3B-201ENST00000333467 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 BRD1O95696 1058 aa13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 SHMT1P34896 483 aa13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 FCGRTP55899 365 aa13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 BACE1P56817 501 aa13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 UBE3CQ15386 1083 aa13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 ANKRD13CQ8N6S4 541 aa13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 SH3TC2Q8TF17 1288 aa13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 SYAP1Q96A49 352 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 SRRDQ9UH36 339 aa13.04□□□□□ -0.32
APOBEC3B-201ENST00000333467 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 USP17L10C9JJH3 530 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 HIP1O00291 1037 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 PRKAB2O43741 272 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 CYP2D6P10635 497 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 NASPP49321 788 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 PRMT2P55345 433 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 PRKCZQ05513 592 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 GABPAQ06546 454 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 FAM110CQ1W6H9 321 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 PANK2Q9BZ23 570 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 ASCC2Q9H1I8 757 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 TMOD4Q9NZQ9 345 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 SGSM2O43147 1006 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 ABCB5Q2M3G0 1257 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 CERKLQ49MI3 558 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 ZSCAN25Q6NSZ9 544 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 KIAA1211Q6ZU35 1233 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 KBTBD3Q8NAB2 608 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 FEZ1Q99689 392 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 PUS7LQ9H0K6 701 aaKnown RBP13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 FRMPD3Q5JV73 1810 aa13.03□□□□□ -0.32
APOBEC3B-201ENST00000333467 ESPNB1AK53 854 aa13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 C19orf81C9J6K1 198 aa13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 MYCP01106 439 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 IRX3P78415 501 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 ZYXQ15942 572 aaKnown RBP13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 NBPF11Q86T75 865 aa13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 SLC44A5Q8NCS7 719 aa13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 RAET1EQ8TD07 263 aa13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 RRAGDQ9NQL2 400 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
APOBEC3B-201ENST00000333467 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
APOBEC3B-201ENST00000333467 HOXD10P28358 340 aa13.01□□□□□ -0.33
APOBEC3B-201ENST00000333467 GCLCP48506 637 aaPredicted RBP13.01□□□□□ -0.33
APOBEC3B-201ENST00000333467 ZSCAN23Q3MJ62 389 aa13.01□□□□□ -0.33
APOBEC3B-201ENST00000333467 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
APOBEC3B-201ENST00000333467 GABRQQ9UN88 632 aa13.01□□□□□ -0.33
APOBEC3B-201ENST00000333467 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
APOBEC3B-201ENST00000333467 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 SMIM22K7EJ46 135 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 MPHOSPH10O00566 681 aaKnown RBP13□□□□□ -0.33
APOBEC3B-201ENST00000333467 NCLP19338 710 aaKnown RBP13□□□□□ -0.33
APOBEC3B-201ENST00000333467 GUCY1A2P33402 732 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 USP17L2Q6R6M4 530 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 DYNLL2Q96FJ2 89 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 C12orf42Q96LP6 360 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 TM6SF1Q9BZW5 370 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 CABP5Q9NP86 173 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 ZSCAN21Q9Y5A6 473 aaPredicted RBP13□□□□□ -0.33
APOBEC3B-201ENST00000333467 ATP6V1DQ9Y5K8 247 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 ZNF236Q9UL36 1845 aa13□□□□□ -0.33
APOBEC3B-201ENST00000333467 HOXA7P31268 230 aaPredicted RBP12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 GRK4P32298 578 aa12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 HERVK_113P62684 666 aa12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 SEPT2Q15019 361 aa12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 AMOTL1Q8IY63 956 aa12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 ACER1Q8TDN7 264 aa12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 APPBP2Q92624 585 aa12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 SWAP70Q9UH65 585 aa12.99□□□□□ -0.33
APOBEC3B-201ENST00000333467 LAMA4Q16363 1823 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 USP17L12C9JPN9 530 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 USP17L21D6R901 530 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 PEX10O60683 326 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 PRPF40AO75400 957 aaKnown RBP12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 VCAM1P19320 739 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 FLT3LGP49771 235 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 CSPP1Q1MSJ5 1256 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 C12orf60Q5U649 245 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 CAVIN1Q6NZI2 390 aaKnown RBP12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 LRSAM1Q6UWE0 723 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 TICAM2Q86XR7 235 aa12.98□□□□□ -0.33
APOBEC3B-201ENST00000333467 CLEC10AQ8IUN9 316 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms