RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 SPATA31A6Q5VVP1 1343 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 CFBP00751 764 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 PRKG1Q13976 671 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 ALX1Q15699 326 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 RUFY1Q96T51 708 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.73□□□□□ -0.696e-7■□□□□ 9.6
SS18L1-201ENST00000331758 FOXP1Q9H334 677 aaPredicted RBP10.73□□□□□ -0.69
SS18L1-201ENST00000331758 LY9Q9HBG7 655 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 AKR1B10O60218 316 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 RAD17O75943 681 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 PRR5LQ6MZQ0 368 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 KRBA2Q6ZNG9 492 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 DYMQ7RTS9 669 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 PGBD1Q96JS3 809 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.73□□□□□ -0.693e-8■■■■■ 29.4
SS18L1-201ENST00000331758 CHMP2AO43633 222 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 ERCC3P19447 782 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 GPSM2P81274 684 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 RAD51AP2Q09MP3 1159 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 CALCRLQ16602 461 aa10.73□□□□□ -0.69
SS18L1-201ENST00000331758 ENAHQ8N8S7 591 aaPredicted RBP10.73□□□□□ -0.69
SS18L1-201ENST00000331758 XPO4Q9C0E2 1151 aaKnown RBP10.73□□□□□ -0.69
SS18L1-201ENST00000331758 CDC25AP30304 524 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 SP4Q02446 784 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 ICA1Q05084 483 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 TXLNBQ8N3L3 684 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 CSRNP2Q9H175 543 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 CPVLQ9H3G5 476 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.72□□□□□ -0.694e-8■■■■□ 19.4
SS18L1-201ENST00000331758 PCDHB6Q9Y5E3 794 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 CDK8P49336 464 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 RBM6P78332 1123 aaKnown RBP10.72□□□□□ -0.69
SS18L1-201ENST00000331758 CLEC17AQ6ZS10 378 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 CABP7Q86V35 215 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 COA1Q9GZY4 146 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 SH2D4AQ9H788 454 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 TAF3Q5VWG9 929 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 CTR9Q6PD62 1173 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 SPICE1Q8N0Z3 855 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 TMEM87AQ8NBN3 555 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 PIK3C2AO00443 1686 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 CAMTA1Q9Y6Y1 1673 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 SLC16A2P36021 539 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 TECP42680 631 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 DPCR1Q3MIW9 517 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 SLC27A3Q5K4L6 730 aa10.72□□□□□ -0.69
SS18L1-201ENST00000331758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.72□□□□□ -0.69
SS18L1-201ENST00000331758 NSUN4Q96CB9 384 aaKnown RBP10.72□□□□□ -0.69
SS18L1-201ENST00000331758 BCL9O00512 1426 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 SYNRGQ9UMZ2 1314 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 ZNF500O60304 480 aaPredicted RBP10.71□□□□□ -0.69
SS18L1-201ENST00000331758 USO1O60763 962 aaKnown RBP10.71□□□□□ -0.69
SS18L1-201ENST00000331758 LRMPQ12912 555 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 SLFN13Q68D06 897 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 CCDC174Q6PII3 467 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
SS18L1-201ENST00000331758 KIFC2Q96AC6 838 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 MASTLQ96GX5 879 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 ACBD3Q9H3P7 528 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.71□□□□□ -0.69
SS18L1-201ENST00000331758 V9GYY5 206 aaPredicted RBP10.71□□□□□ -0.69
SS18L1-201ENST00000331758 C21orf2O43822 256 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 USP8P40818 1118 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.69
SS18L1-201ENST00000331758 C11orf57Q6ZUT1 292 aaPredicted RBP10.71□□□□□ -0.69
SS18L1-201ENST00000331758 KCTD1Q719H9 257 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 SPAG5Q96R06 1193 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 ALDH8A1Q9H2A2 487 aaPredicted RBP10.71□□□□□ -0.69
SS18L1-201ENST00000331758 HOMER2Q9NSB8 354 aa10.71□□□□□ -0.69
SS18L1-201ENST00000331758 RPAP1Q9BWH6 1393 aaPredicted RBP10.71□□□□□ -0.7
SS18L1-201ENST00000331758 BICDL2A1A5D9 508 aa10.71□□□□□ -0.7
SS18L1-201ENST00000331758 CCDC66A2RUB6 948 aa10.71□□□□□ -0.7
SS18L1-201ENST00000331758 GDF11O95390 407 aa10.71□□□□□ -0.7
SS18L1-201ENST00000331758 STXBP4Q6ZWJ1 553 aa10.71□□□□□ -0.7
SS18L1-201ENST00000331758 GRAMD1CQ8IYS0 662 aa10.71□□□□□ -0.7
SS18L1-201ENST00000331758 CSRNP1Q96S65 589 aa10.71□□□□□ -0.7
SS18L1-201ENST00000331758 PSTPIP2Q9H939 334 aa10.71□□□□□ -0.7
SS18L1-201ENST00000331758 GOLGA6L9A6NEM1 432 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 TRAF5O00463 557 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 PRPF3O43395 683 aaKnown RBP10.7□□□□□ -0.7
SS18L1-201ENST00000331758 PPP6R2O75170 966 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 KLRK1P26718 216 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 ARID5AQ03989 594 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 PAK1Q13153 545 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 NEK8Q86SG6 692 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 IGSF22Q8N9C0 903 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 EEF2KMTQ96G04 330 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 EPB41L4AQ9HCS5 686 aaPredicted RBP10.7□□□□□ -0.7
SS18L1-201ENST00000331758 LZTFL1Q9NQ48 299 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 RGPD8O14715 1765 aaPredicted RBP10.7□□□□□ -0.7
SS18L1-201ENST00000331758 KNDC1Q76NI1 1749 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 NCAPH2Q6IBW4 605 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 CSGALNACT2Q8N6G5 542 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 ZNF512BQ96KM6 892 aaPredicted RBP10.7□□□□□ -0.7
SS18L1-201ENST00000331758 PIGSQ96S52 555 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 FANCLQ9NW38 375 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 PAXBP1Q9Y5B6 917 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 PNPLA7Q6ZV29 1317 aa10.7□□□□□ -0.7
SS18L1-201ENST00000331758 FAM196BA6NMK8 535 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms