RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ALKBH8Q96BT7 664 aaKnown RBP11.69□□□□□ -0.54
CLN8-201ENST00000331222 MRPL46Q9H2W6 279 aaKnown RBP11.69□□□□□ -0.54
CLN8-201ENST00000331222 EFCC1Q9HA90 598 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 DISC1Q9NRI5 854 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 SFMBT1Q9UHJ3 866 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 PTPN22Q9Y2R2 807 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 NOC2LQ9Y3T9 749 aaKnown RBP11.69□□□□□ -0.54
CLN8-201ENST00000331222 ZNF532Q9HCE3 1301 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 I3L4J1 428 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 ANKRD44Q8N8A2 993 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 PRDM5Q9NQX1 630 aaPredicted RBP11.68□□□□□ -0.54
CLN8-201ENST00000331222 NPATQ14207 1427 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 BUB1O43683 1085 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 RPS6KB1P23443 525 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 CABP7Q86V35 215 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 AKT3Q9Y243 479 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 PLCD1P51178 756 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 PNOCQ13519 176 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 RRAGAQ7L523 313 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 HDXQ7Z353 690 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 MYLK4Q86YV6 388 aaPredicted RBP11.68□□□□□ -0.54
CLN8-201ENST00000331222 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 DCPSQ96C86 337 aaKnown RBP11.68□□□□□ -0.54
CLN8-201ENST00000331222 TRIM56Q9BRZ2 755 aaKnown RBP11.68□□□□□ -0.54
CLN8-201ENST00000331222 KCNH3Q9ULD8 1083 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 CASQ2O14958 399 aaPredicted RBP11.68□□□□□ -0.54
CLN8-201ENST00000331222 BAG2O95816 211 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 LIG4P49917 911 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 CYP26C1Q6V0L0 522 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 DBNDD2Q9BQY9 259 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 KDRP35968 1356 aa11.68□□□□□ -0.54
CLN8-201ENST00000331222 NR1I2O75469 434 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 BRD3Q15059 726 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 RBBP5Q15291 538 aaKnown RBP11.67□□□□□ -0.54
CLN8-201ENST00000331222 EEPD1Q7L9B9 569 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 UBN1Q9NPG3 1134 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 LRRIQ4A6NIV6 560 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 PDE8AO60658 829 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 KCNQ4P56696 695 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 TFAP4Q01664 338 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 SCAF11Q99590 1463 aaKnown RBP11.67□□□□□ -0.54
CLN8-201ENST00000331222 DEXIO95424 95 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 GBP1P32455 592 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 SESN3P58005 492 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
CLN8-201ENST00000331222 LGR6Q9HBX8 967 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 INPP5FQ9Y2H2 1132 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 BCRP11274 1271 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 ZAP70P43403 619 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 MTX1Q13505 466 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 POLA2Q14181 598 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 MIER3Q7Z3K6 550 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 CNGA4Q8IV77 575 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 HACE1Q8IYU2 909 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 GANCQ8TET4 914 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
CLN8-201ENST00000331222 NUCKS1Q9H1E3 243 aaKnown RBP11.67□□□□□ -0.54
CLN8-201ENST00000331222 POLIQ9UNA4 740 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 SYNDIG1LA6NDD5 238 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 ACTN4O43707 911 aaKnown RBP11.67□□□□□ -0.54
CLN8-201ENST00000331222 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 RAPH1Q70E73 1250 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 SND1Q7KZF4 910 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLN8-201ENST00000331222 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 OTUD7AQ8TE49 926 aaPredicted RBP11.67□□□□□ -0.54
CLN8-201ENST00000331222 AFAP1L1Q8TED9 768 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 ABT1Q9ULW3 272 aaKnown RBP11.67□□□□□ -0.54
CLN8-201ENST00000331222 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 STAM2O75886 525 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 RILPL1Q5EBL4 403 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 TRIM68Q6AZZ1 485 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 PPFIBP2Q8ND30 876 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 PHACTR3Q96KR7 559 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 EYA1Q99502 592 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 SLF1Q9BQI6 1058 aa11.67□□□□□ -0.54
CLN8-201ENST00000331222 MX2P20592 715 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 PIK3CAP42336 1068 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 LONRF2Q1L5Z9 754 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 OTUD6AQ7L8S5 288 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 PEX26Q7Z412 305 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 MCUQ8NE86 351 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 CDCA7Q9BWT1 371 aaPredicted RBP11.66□□□□□ -0.54
CLN8-201ENST00000331222 ARHGAP42A6NI28 874 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 MYL5Q02045 173 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 EDC3Q96F86 508 aaKnown RBP11.66□□□□□ -0.54
CLN8-201ENST00000331222 K7ENM7 598 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 EIF4G3O43432 1585 aaKnown RBP11.66□□□□□ -0.54
CLN8-201ENST00000331222 ADKP55263 362 aaKnown RBP11.66□□□□□ -0.54
CLN8-201ENST00000331222 XKR9Q5GH70 373 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 MYSM1Q5VVJ2 828 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 DPP9Q86TI2 863 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 SPATA5Q8NB90 893 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 CCDC127Q96BQ5 260 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 PRIMPOLQ96LW4 560 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 LRWD1Q9UFC0 647 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 RABGAP1Q9Y3P9 1069 aa11.66□□□□□ -0.54
CLN8-201ENST00000331222 ECE1P42892 770 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms