RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 RCSD1Q6JBY9 416 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 AMOTL1Q8IY63 956 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 CCDC24Q8N4L8 307 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 PAGE5Q96GU1 130 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 EPSTI1Q96J88 318 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 SH3GLB2Q9NR46 395 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 MKRN1Q9UHC7 482 aaKnown RBP25.47■■□□□ 1.67
PNKP-201ENST00000322344 ROBO3Q96MS0 1386 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 USP5P45974 858 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 GSDMAQ96QA5 445 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 INTS13Q9NVM9 706 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 THSD7AQ9UPZ6 1657 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 TMEM232C9JQI7 657 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 BAG3O95817 575 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 RFC4P35249 363 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 GNAQP50148 359 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 TBX2Q13207 712 aaPredicted RBP25.46■■□□□ 1.67
PNKP-201ENST00000322344 ANKIB1Q9P2G1 1089 aa25.46■■□□□ 1.67
PNKP-201ENST00000322344 TNRC6CQ9HCJ0 1690 aaKnown RBP25.45■■□□□ 1.67
PNKP-201ENST00000322344 A0A087X0B3 334 aa25.45■■□□□ 1.66
PNKP-201ENST00000322344 USP17L8P0C7I0 530 aa25.45■■□□□ 1.66
PNKP-201ENST00000322344 ZNF827Q17R98 1081 aa25.45■■□□□ 1.66
PNKP-201ENST00000322344 C15orf52Q6ZUT6 534 aaKnown RBP25.45■■□□□ 1.66
PNKP-201ENST00000322344 XDHP47989 1333 aa25.45■■□□□ 1.66
PNKP-201ENST00000322344 LDHCP07864 332 aa25.44■■□□□ 1.66
PNKP-201ENST00000322344 PPP4CP60510 307 aa25.44■■□□□ 1.66
PNKP-201ENST00000322344 TFAP4Q01664 338 aa25.44■■□□□ 1.66
PNKP-201ENST00000322344 PTGDRQ13258 359 aa25.44■■□□□ 1.66
PNKP-201ENST00000322344 TRAPPC3LQ5T215 181 aa25.44■■□□□ 1.66
PNKP-201ENST00000322344 ZNF804AQ7Z570 1209 aa25.44■■□□□ 1.66
PNKP-201ENST00000322344 CERS3Q8IU89 383 aa25.44■■□□□ 1.66
PNKP-201ENST00000322344 ERO1AQ96HE7 468 aa25.44■■□□□ 1.66
PNKP-201ENST00000322344 BCL11BQ9C0K0 894 aaPredicted RBP25.44■■□□□ 1.66
PNKP-201ENST00000322344 WNT7AO00755 349 aa25.43■■□□□ 1.66
PNKP-201ENST00000322344 ARHGAP6O43182 974 aa25.43■■□□□ 1.66
PNKP-201ENST00000322344 DPYDQ12882 1025 aa25.43■■□□□ 1.66
PNKP-201ENST00000322344 SPECC1LQ69YQ0 1117 aa25.43■■□□□ 1.66
PNKP-201ENST00000322344 TCP11L1Q9NUJ3 509 aa25.43■■□□□ 1.66
PNKP-201ENST00000322344 CGNQ9P2M7 1197 aaKnown RBP25.43■■□□□ 1.66
PNKP-201ENST00000322344 SPATA1Q5VX52 437 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 PIK3AP1Q6ZUJ8 805 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 IQUBQ8NA54 791 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 JAG2Q9Y219 1238 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 LY75O60449 1722 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 VWA3AA6NCI4 1184 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 ZSCAN12O43309 604 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 AFMP43652 599 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 GRM4Q14833 912 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 NOM1Q5C9Z4 860 aaKnown RBP25.42■■□□□ 1.66
PNKP-201ENST00000322344 PPP4R3BQ5MIZ7 849 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 ARL6IP4Q66PJ3 421 aaKnown RBP25.42■■□□□ 1.66
PNKP-201ENST00000322344 AMIGO3Q86WK7 504 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 TRMT44Q8IYL2 757 aaKnown RBP25.42■■□□□ 1.66
PNKP-201ENST00000322344 CNBD1Q8NA66 436 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 PNMA1Q8ND90 353 aa25.42■■□□□ 1.66
PNKP-201ENST00000322344 SLU7O95391 586 aaKnown RBP25.41■■□□□ 1.66
PNKP-201ENST00000322344 BLIDQ8IZY5 108 aa25.41■■□□□ 1.66
PNKP-201ENST00000322344 FAM177A1Q8N128 213 aaPredicted RBP25.41■■□□□ 1.66
PNKP-201ENST00000322344 MED15Q96RN5 788 aa25.41■■□□□ 1.66
PNKP-201ENST00000322344 MKNK2Q9HBH9 465 aa25.41■■□□□ 1.66
PNKP-201ENST00000322344 TAF1LQ8IZX4 1826 aa25.41■■□□□ 1.66
PNKP-201ENST00000322344 SH3RF3Q8TEJ3 882 aaPredicted RBP25.41■■□□□ 1.66
PNKP-201ENST00000322344 L2HGDHQ9H9P8 463 aa25.41■■□□□ 1.66
PNKP-201ENST00000322344 IL17RBQ9NRM6 502 aa25.41■■□□□ 1.66
PNKP-201ENST00000322344 USP21Q9UK80 565 aa25.41■■□□□ 1.66
PNKP-201ENST00000322344 CUL4BQ13620 913 aa25.4■■□□□ 1.66
PNKP-201ENST00000322344 NFIXQ14938 502 aa25.4■■□□□ 1.66
PNKP-201ENST00000322344 ZNF215Q9UL58 517 aaPredicted RBP25.4■■□□□ 1.66
PNKP-201ENST00000322344 PCDHA4Q9UN74 947 aa25.4■■□□□ 1.66
PNKP-201ENST00000322344 SYNRGQ9UMZ2 1314 aa25.4■■□□□ 1.66
PNKP-201ENST00000322344 SBF2Q86WG5 1849 aa25.39■■□□□ 1.66
PNKP-201ENST00000322344 A0A1B0GTH6 734 aa25.39■■□□□ 1.66
PNKP-201ENST00000322344 ETF1P62495 437 aaKnown RBP25.39■■□□□ 1.66
PNKP-201ENST00000322344 NR1I3Q14994 352 aa25.39■■□□□ 1.66
PNKP-201ENST00000322344 GALNT17Q6IS24 598 aa25.39■■□□□ 1.66
PNKP-201ENST00000322344 TMEM139Q8IV31 216 aa25.39■■□□□ 1.66
PNKP-201ENST00000322344 ZNF287Q9HBT7 754 aa25.39■■□□□ 1.66
PNKP-201ENST00000322344 SAMSN1Q9NSI8 373 aaKnown RBP25.39■■□□□ 1.66
PNKP-201ENST00000322344 PHLPP2Q6ZVD8 1323 aa25.39■■□□□ 1.66
PNKP-201ENST00000322344 STX10O60499 249 aa25.39■■□□□ 1.65
PNKP-201ENST00000322344 ADRA2BP18089 450 aa25.39■■□□□ 1.65
PNKP-201ENST00000322344 LONP1P36776 959 aaKnown RBP25.39■■□□□ 1.65
PNKP-201ENST00000322344 E2F4Q16254 413 aa25.39■■□□□ 1.65
PNKP-201ENST00000322344 SYT10Q6XYQ8 523 aa25.39■■□□□ 1.65
PNKP-201ENST00000322344 HOMER1Q86YM7 354 aa25.39■■□□□ 1.65
PNKP-201ENST00000322344 GOLGA6L9A6NEM1 432 aa25.38■■□□□ 1.65
PNKP-201ENST00000322344 ZNF444Q8N0Y2 327 aaPredicted RBP25.38■■□□□ 1.65
PNKP-201ENST00000322344 CCDC148Q8NFR7 591 aa25.38■■□□□ 1.65
PNKP-201ENST00000322344 CTAGE1Q96RT6 745 aa25.38■■□□□ 1.65
PNKP-201ENST00000322344 BAG1Q99933 345 aaPredicted RBP25.38■■□□□ 1.65
PNKP-201ENST00000322344 TSPY3P0CV98 308 aa25.37■■□□□ 1.65
PNKP-201ENST00000322344 TSPY8P0CW00 308 aa25.37■■□□□ 1.65
PNKP-201ENST00000322344 HSP90AA4PQ58FG1 418 aa25.37■■□□□ 1.65
PNKP-201ENST00000322344 DYNLL2Q96FJ2 89 aa25.37■■□□□ 1.65
PNKP-201ENST00000322344 LZTS2Q9BRK4 669 aa25.37■■□□□ 1.65
PNKP-201ENST00000322344 GTPBP6O43824 516 aaPredicted RBP25.37■■□□□ 1.65
PNKP-201ENST00000322344 MCM7P33993 719 aa25.37■■□□□ 1.65
PNKP-201ENST00000322344 DAGLBQ8NCG7 672 aa25.37■■□□□ 1.65
PNKP-201ENST00000322344 TXLNAP40222 546 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 CDKAL1Q5VV42 579 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms