RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SMCR8Q8TEV9 937 aaPredicted RBP19.66■□□□□ 0.74
LRRC42-201ENST00000319223 ARHGAP39Q9C0H5 1083 aa19.66■□□□□ 0.74
LRRC42-201ENST00000319223 PNMA3Q9UL41 463 aa19.66■□□□□ 0.74
LRRC42-201ENST00000319223 CYP21A2P08686 494 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 CTGFP29279 349 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 IRX3P78415 501 aaPredicted RBP19.65■□□□□ 0.74
LRRC42-201ENST00000319223 CATSPERGQ6ZRH7 1159 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L15C9J2P7 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L13C9JLJ4 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L11C9JVI0 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L18D6R9N7 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L22D6RA61 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L17D6RBQ6 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L19D6RCP7 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L20D6RJB6 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 USP17L24Q0WX57 530 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 LRRC47Q8N1G4 583 aaKnown RBP19.65■□□□□ 0.74
LRRC42-201ENST00000319223 ANKRD13CQ8N6S4 541 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 MKL1Q969V6 931 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 SH2D4AQ9H788 454 aa19.65■□□□□ 0.74
LRRC42-201ENST00000319223 RBM8AQ9Y5S9 174 aaKnown RBP19.65■□□□□ 0.74
LRRC42-201ENST00000319223 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
LRRC42-201ENST00000319223 ZSWIM8A7E2V4 1837 aa19.64■□□□□ 0.74
LRRC42-201ENST00000319223 TTLL1O95922 423 aa19.64■□□□□ 0.73
LRRC42-201ENST00000319223 HERVK_113P62684 666 aa19.64■□□□□ 0.73
LRRC42-201ENST00000319223 KIAA1211Q6ZU35 1233 aa19.64■□□□□ 0.73
LRRC42-201ENST00000319223 RNF41Q9H4P4 317 aaPredicted RBP19.64■□□□□ 0.73
LRRC42-201ENST00000319223 RAD21O60216 631 aa19.63■□□□□ 0.73
LRRC42-201ENST00000319223 PCP11498 1178 aaKnown RBP19.63■□□□□ 0.73
LRRC42-201ENST00000319223 LACTBP83111 547 aaPredicted RBP19.63■□□□□ 0.73
LRRC42-201ENST00000319223 NUP88Q99567 741 aaPredicted RBP19.63■□□□□ 0.73
LRRC42-201ENST00000319223 TXNRD2Q9NNW7 524 aa19.63■□□□□ 0.73
LRRC42-201ENST00000319223 ANO2Q9NQ90 1003 aa19.63■□□□□ 0.73
LRRC42-201ENST00000319223 B4E1Z4 1266 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 F5H6K3 240 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 NOVP48745 357 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 KLRC3Q07444 240 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 CTU1Q7Z7A3 348 aaKnown RBP19.62■□□□□ 0.73
LRRC42-201ENST00000319223 LPAR1Q92633 364 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 ERO1AQ96HE7 468 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 ZKSCAN3Q9BRR0 538 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 RBPJLQ9UBG7 517 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 STX8Q9UNK0 236 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 MYH4Q9Y623 1939 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 KDM4AO75164 1064 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 NDUFB10O96000 172 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 CHMP4CQ96CF2 233 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 TANGO6Q9C0B7 1094 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 GOPCQ9HD26 462 aa19.62■□□□□ 0.73
LRRC42-201ENST00000319223 WDR46O15213 610 aaKnown RBP19.61■□□□□ 0.73
LRRC42-201ENST00000319223 FAM83BQ5T0W9 1011 aa19.61■□□□□ 0.73
LRRC42-201ENST00000319223 STOX1Q6ZVD7 989 aa19.61■□□□□ 0.73
LRRC42-201ENST00000319223 OTOP1Q7RTM1 612 aa19.61■□□□□ 0.73
LRRC42-201ENST00000319223 ESR2Q92731 530 aa19.61■□□□□ 0.73
LRRC42-201ENST00000319223 MCOLN1Q9GZU1 580 aa19.61■□□□□ 0.73
LRRC42-201ENST00000319223 TCP11L1Q9NUJ3 509 aa19.61■□□□□ 0.73
LRRC42-201ENST00000319223 ZSWIM5Q9P217 1185 aa19.61■□□□□ 0.73
LRRC42-201ENST00000319223 TRIM17Q9Y577 477 aa19.61■□□□□ 0.73
LRRC42-201ENST00000319223 SPDYE16A6NNV3 312 aaPredicted RBP19.6■□□□□ 0.73
LRRC42-201ENST00000319223 GCLCP48506 637 aaPredicted RBP19.6■□□□□ 0.73
LRRC42-201ENST00000319223 RLFQ13129 1914 aa19.6■□□□□ 0.73
LRRC42-201ENST00000319223 Q3C1V9 767 aa19.6■□□□□ 0.73
LRRC42-201ENST00000319223 RCSD1Q6JBY9 416 aa19.6■□□□□ 0.73
LRRC42-201ENST00000319223 CASC1Q6TDU7 716 aa19.6■□□□□ 0.73
LRRC42-201ENST00000319223 RASGRP2Q7LDG7 609 aa19.6■□□□□ 0.73
LRRC42-201ENST00000319223 FBXO28Q9NVF7 368 aa19.6■□□□□ 0.73
LRRC42-201ENST00000319223 CNMDO75829 334 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 COG2Q14746 738 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 NECTIN1Q15223 517 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 FAM110CQ1W6H9 321 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 TNS4Q8IZW8 715 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 TRIM47Q96LD4 638 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 E7EWF7 191 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 PSMC4P43686 418 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
LRRC42-201ENST00000319223 CYB5R4Q7L1T6 521 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 GMCL1P1Q8NEA9 526 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 TMEM47Q9BQJ4 181 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 PAGR1Q9BTK6 254 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 EFCC1Q9HA90 598 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 MORF4L1Q9UBU8 362 aa19.59■□□□□ 0.73
LRRC42-201ENST00000319223 SLC27A2O14975 620 aa19.58■□□□□ 0.72
LRRC42-201ENST00000319223 FLOT1O75955 427 aa19.58■□□□□ 0.72
LRRC42-201ENST00000319223 COL9A3Q14050 684 aaPredicted RBP19.58■□□□□ 0.72
LRRC42-201ENST00000319223 SLFN13Q68D06 897 aa19.58■□□□□ 0.72
LRRC42-201ENST00000319223 KRT23Q9C075 422 aa19.58■□□□□ 0.72
LRRC42-201ENST00000319223 BTBD7Q9P203 1132 aa19.58■□□□□ 0.72
LRRC42-201ENST00000319223 DSG3P32926 999 aa19.57■□□□□ 0.72
LRRC42-201ENST00000319223 KIF22Q14807 665 aa19.57■□□□□ 0.72
LRRC42-201ENST00000319223 CREB3L3Q68CJ9 461 aa19.57■□□□□ 0.72
LRRC42-201ENST00000319223 LBX2Q6XYB7 198 aa19.57■□□□□ 0.72
LRRC42-201ENST00000319223 ATG4CQ96DT6 458 aa19.57■□□□□ 0.72
LRRC42-201ENST00000319223 SYNPO2Q9UMS6 1093 aa19.57■□□□□ 0.72
LRRC42-201ENST00000319223 MTMR7Q9Y216 660 aa19.57■□□□□ 0.72
LRRC42-201ENST00000319223 FMNL1O95466 1100 aaPredicted RBP19.56■□□□□ 0.72
LRRC42-201ENST00000319223 MCCP23508 829 aa19.56■□□□□ 0.72
LRRC42-201ENST00000319223 GPRC5AQ8NFJ5 357 aa19.56■□□□□ 0.72
LRRC42-201ENST00000319223 CNNM2Q9H8M5 875 aa19.56■□□□□ 0.72
LRRC42-201ENST00000319223 HOXC10Q9NYD6 342 aa19.56■□□□□ 0.72
LRRC42-201ENST00000319223 PARP14Q460N5 1801 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms