RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 TRPM3Q9HCF6 1732 aaPredicted RBP25.2■■□□□ 1.63
GRAMD1A-201ENST00000317991 GPTP24298 496 aa25.2■■□□□ 1.62
GRAMD1A-201ENST00000317991 TUBB4BP68371 445 aa25.2■■□□□ 1.62
GRAMD1A-201ENST00000317991 SNAP23O00161 211 aa25.2■■□□□ 1.62
GRAMD1A-201ENST00000317991 WDR93Q6P2C0 686 aa25.2■■□□□ 1.62
GRAMD1A-201ENST00000317991 GSDMAQ96QA5 445 aa25.2■■□□□ 1.62
GRAMD1A-201ENST00000317991 MMS19Q96T76 1030 aa25.2■■□□□ 1.62
GRAMD1A-201ENST00000317991 MAPK8IP1Q9UQF2 711 aa25.2■■□□□ 1.62
GRAMD1A-201ENST00000317991 PCCAP05165 728 aaPredicted RBP25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 MAGEA9P43362 315 aa25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 FANCBQ8NB91 859 aa25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 ITIH6Q6UXX5 1313 aa25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 ZNF174Q15697 407 aa25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 RRAGBQ5VZM2 374 aa25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 CCDC148Q8NFR7 591 aa25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 HINFPQ9BQA5 517 aa25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 MED4Q9NPJ6 270 aa25.19■■□□□ 1.62
GRAMD1A-201ENST00000317991 GSG1L2A8MUP6 293 aa25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 COPB1P53618 953 aaKnown RBP25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 ALX1Q15699 326 aa25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 CAPZA3Q96KX2 299 aa25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 MKRN1Q9UHC7 482 aaKnown RBP25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 GSPT2Q8IYD1 628 aaKnown RBP25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 VGLL2Q8N8G2 317 aa25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 EPN1Q9Y6I3 576 aaPredicted RBP25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 WDR17Q8IZU2 1322 aa25.18■■□□□ 1.62
GRAMD1A-201ENST00000317991 SMIM22K7EJ46 135 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 SEMA3EO15041 775 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 ATP1A1P05023 1023 aaKnown RBP25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 USP14P54578 494 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 LIMA1Q9UHB6 759 aaKnown RBP25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 ZNF335Q9H4Z2 1342 aaPredicted RBP25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 PRPF6O94906 941 aaKnown RBP25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 CT47A1Q5JQC4 288 aaPredicted RBP25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 TRAPPC11Q7Z392 1133 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 ZNF654Q8IZM8 581 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 GOLGA6L1Q8N7Z2 621 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 ZBTB38Q8NAP3 1195 aaPredicted RBP25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 KRT23Q9C075 422 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 MYO1AQ9UBC5 1043 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 XDHP47989 1333 aa25.17■■□□□ 1.62
GRAMD1A-201ENST00000317991 NDUFA10O95299 355 aa25.16■■□□□ 1.62
GRAMD1A-201ENST00000317991 AFAP1L1Q8TED9 768 aa25.16■■□□□ 1.62
GRAMD1A-201ENST00000317991 CNNM2Q9H8M5 875 aa25.16■■□□□ 1.62
GRAMD1A-201ENST00000317991 TTC31Q49AM3 519 aaPredicted RBP25.16■■□□□ 1.62
GRAMD1A-201ENST00000317991 ACBD3Q9H3P7 528 aa25.16■■□□□ 1.62
GRAMD1A-201ENST00000317991 HPCAL4Q9UM19 191 aa25.16■■□□□ 1.62
GRAMD1A-201ENST00000317991 LRRC10BA6NIK2 292 aa25.15■■□□□ 1.62
GRAMD1A-201ENST00000317991 TDO2P48775 406 aa25.15■■□□□ 1.62
GRAMD1A-201ENST00000317991 CORO7P57737 925 aa25.15■■□□□ 1.62
GRAMD1A-201ENST00000317991 ZNF512BQ96KM6 892 aaPredicted RBP25.15■■□□□ 1.62
GRAMD1A-201ENST00000317991 LRP6O75581 1613 aa25.15■■□□□ 1.62
GRAMD1A-201ENST00000317991 PDE8BO95263 885 aa25.15■■□□□ 1.62
GRAMD1A-201ENST00000317991 MTRQ99707 1265 aa25.15■■□□□ 1.62
GRAMD1A-201ENST00000317991 PLA2G12BQ9BX93 195 aa25.15■■□□□ 1.62
GRAMD1A-201ENST00000317991 ZC3H4Q9UPT8 1303 aaKnown RBP25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 ERICH2A1L162 156 aa25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 KCNJ18B7U540 433 aa25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 MYBL2P10244 700 aa25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 UBXN1Q04323 297 aa25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 KCNJ12Q14500 433 aa25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 SART3Q15020 963 aaKnown RBP25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 TCP11X2Q5H9J9 407 aa25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 LCORLQ8N3X6 602 aa25.14■■□□□ 1.62
GRAMD1A-201ENST00000317991 TTC26A0AVF1 554 aa25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 AARSP49588 968 aaKnown RBP eCLIP25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 PKN1Q16512 942 aa25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 TUBBP07437 444 aa25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 GGCXP38435 758 aa25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 HLFQ16534 295 aa25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 NELFBQ8WX92 580 aa25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 SLC4A4Q9Y6R1 1079 aa25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 NID2Q14112 1375 aa25.13■■□□□ 1.61
GRAMD1A-201ENST00000317991 BAZ2BQ9UIF8 2168 aaKnown RBP25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 CCDC196A0A1B0GTZ2 297 aa25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 ANKRD18BA2A2Z9 1011 aa25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 PPFIA4O75335 1185 aa25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 ARID4AP29374 1257 aaPredicted RBP25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 MIGA1Q8NAN2 632 aa25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 ICE2Q659A1 982 aa25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 SPATA5Q8NB90 893 aa25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 GDAQ9Y2T3 454 aa25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 SAR1BQ9Y6B6 198 aa25.12■■□□□ 1.61
GRAMD1A-201ENST00000317991 ATF3P18847 181 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 KRT2P35908 639 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 HERVK_113P62684 666 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 PAK1Q13153 545 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 PTGDRQ13258 359 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 TRIM28Q13263 835 aaKnown RBP25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 STAG1Q8WVM7 1258 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 VIPAS39Q9H9C1 493 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 V9GY48 417 aaPredicted RBP25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 CHD4Q14839 1912 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 PSMD14O00487 310 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 PES1O00541 588 aaKnown RBP25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 ZNF185O15231 689 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 RASGRF1Q13972 1273 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 CCDC122Q5T0U0 273 aa25.11■■□□□ 1.61
GRAMD1A-201ENST00000317991 RWDD2AQ9UIY3 292 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms