RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LRRC47Q8N1G4 583 aaKnown RBP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 DHRS1Q96LJ7 313 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 FOXQ1Q9C009 403 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 MKRN2Q9H000 416 aaKnown RBP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 DAGLAQ9Y4D2 1042 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 ZNF451Q9Y4E5 1061 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 ANKRD34BA5PLL1 514 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 RAPGEF3O95398 923 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 ELNP15502 786 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 CAP2P40123 477 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 BBS9Q3SYG4 887 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 CDPF1Q6NVV7 123 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 IGF2-ASQ6U949 168 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 ZNF227Q86WZ6 799 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 LRRN4CLQ8ND94 238 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 DNAJB8Q8NHS0 232 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 STAG1Q8WVM7 1258 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 MIPEPQ99797 713 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 EPN3Q9H201 632 aa5.67□□□□□ -1.5
SMCO3-201ENST00000316048 WFS1O76024 890 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 TRIM28Q13263 835 aaKnown RBP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 SNW1Q13573 536 aaKnown RBP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 CDH24Q86UP0 819 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 KISS1RQ969F8 398 aaPredicted RBP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 SEMA6CQ9H3T2 930 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 CWC22Q9HCG8 908 aaKnown RBP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 LRP2BPQ9P2M1 347 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 MRPS23Q9Y3D9 190 aaKnown RBP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 WIZO95785 1651 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 SMARCA4P51532 1647 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 GNB5O14775 395 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 ARHGEF15O94989 841 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 SLITRK5O94991 958 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 PABPC4Q13310 644 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 NBPF12Q5TAG4 269 aaPredicted RBP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 ZCRB1Q8TBF4 217 aaKnown RBP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 ACSS3Q9H6R3 686 aa5.66□□□□□ -1.5
SMCO3-201ENST00000316048 NCOA5Q9HCD5 579 aaKnown RBP5.66□□□□□ -1.5
SMCO3-201ENST00000316048 CNTNAP4Q9C0A0 1308 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 IQCA1LA6NCM1 817 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 SPDYE3A6NKU9 549 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 LRIG2O94898 1065 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 NFICP08651 508 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 EVA1CP58658 441 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 SF1Q15637 639 aaKnown RBP5.65□□□□□ -1.5
SMCO3-201ENST00000316048 SGO2Q562F6 1265 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 ADAT2Q7Z6V5 191 aaKnown RBP5.65□□□□□ -1.5
SMCO3-201ENST00000316048 THNSL2Q86YJ6 484 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 JAMLQ86YT9 394 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 NIM1KQ8IY84 436 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 UBR7Q8N806 425 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 KCT2Q8NC54 265 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 DCAF11Q8TEB1 546 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 FBLIM1Q8WUP2 373 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 VWCEQ96DN2 955 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 SGSM3Q96HU1 749 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 KREMEN1Q96MU8 473 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 BRINP2Q9C0B6 783 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 SUGT1Q9Y2Z0 365 aa5.65□□□□□ -1.5
SMCO3-201ENST00000316048 GLB1P16278 677 aa5.65□□□□□ -1.51
SMCO3-201ENST00000316048 POU3F3P20264 500 aaPredicted RBP5.65□□□□□ -1.51
SMCO3-201ENST00000316048 CDK5R2Q13319 367 aa5.65□□□□□ -1.51
SMCO3-201ENST00000316048 TM4SF20Q53R12 229 aa5.65□□□□□ -1.51
SMCO3-201ENST00000316048 ANKRD34AQ69YU3 496 aa5.65□□□□□ -1.51
SMCO3-201ENST00000316048 LETMD1Q6P1Q0 360 aa5.65□□□□□ -1.51
SMCO3-201ENST00000316048 SLC26A8Q96RN1 970 aa5.65□□□□□ -1.51
SMCO3-201ENST00000316048 UBL7Q96S82 380 aaPredicted RBP5.65□□□□□ -1.51
SMCO3-201ENST00000316048 CDC6Q99741 560 aa5.65□□□□□ -1.51
SMCO3-201ENST00000316048 APBA2Q99767 749 aa5.65□□□□□ -1.51
SMCO3-201ENST00000316048 AARSD1Q9BTE6 412 aaKnown RBP5.65□□□□□ -1.51
SMCO3-201ENST00000316048 TRAV20A0A0B4J274 112 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 AGRPO00253 132 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 LRRN2O75325 713 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 VIL1P09327 827 aaKnown RBP5.64□□□□□ -1.51
SMCO3-201ENST00000316048 MYCLP1P12525 358 aaPredicted RBP5.64□□□□□ -1.51
SMCO3-201ENST00000316048 CD247P20963 164 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 AUHQ13825 339 aaKnown RBP5.64□□□□□ -1.51
SMCO3-201ENST00000316048 LONRF2Q1L5Z9 754 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 NINJ1Q92982 152 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 BRF1Q92994 677 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 ZNF775Q96BV0 537 aaPredicted RBP5.64□□□□□ -1.51
SMCO3-201ENST00000316048 DHRS4Q9BTZ2 278 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 MINPP1Q9UNW1 487 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 PLAAQ9Y263 795 aa5.64□□□□□ -1.51
SMCO3-201ENST00000316048 A0A087X0B3 334 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 TRBV23-1A0A0A0MS06 115 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 BLACEA4D250 179 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 PRODHO43272 600 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 CAPNS1P04632 268 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 ZNF143P52747 638 aaPredicted RBP5.63□□□□□ -1.51
SMCO3-201ENST00000316048 BTN2A2Q8WVV5 523 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 OSBP2Q969R2 916 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 MFSD3Q96ES6 412 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 PSMG3-AS1Q96PY0 264 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 IER2Q9BTL4 223 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 AKTIPQ9H8T0 292 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 GP6Q9HCN6 339 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms