RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 HSPA1AP0DMV8 641 aaKnown RBP9.33□□□□□ -0.92
CDC42-201ENST00000315554 HSPA1BP0DMV9 641 aaKnown RBP9.33□□□□□ -0.92
CDC42-201ENST00000315554 HMGCS2P54868 508 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 PDE4BQ07343 736 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 SNAPC2Q13487 334 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 MTMR2Q13614 643 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 CASC1Q6TDU7 716 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 KIAA1211Q6ZU35 1233 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 ZNF444Q8N0Y2 327 aaPredicted RBP9.33□□□□□ -0.92
CDC42-201ENST00000315554 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 ZNF280CQ8ND82 737 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 CHMP4CQ96CF2 233 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDC42-201ENST00000315554 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.33□□□□□ -0.923e-6■■■□□ 16.2
CDC42-201ENST00000315554 RBM8AQ9Y5S9 174 aaKnown RBP9.33□□□□□ -0.92
CDC42-201ENST00000315554 ZMYM6O95789 1325 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 NEDD4P46934 1319 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 A0A1W2PRG0 241 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 BTBD19C9JJ37 291 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 NMT2O60551 498 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 CETPP11597 493 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 CDK11BP21127 795 aaKnown RBP9.32□□□□□ -0.92
CDC42-201ENST00000315554 TFAP4Q01664 338 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 ICA1Q05084 483 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 SREBF2Q12772 1141 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 MOGSQ13724 837 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 IMMTQ16891 758 aaKnown RBP9.32□□□□□ -0.92
CDC42-201ENST00000315554 TMEM179Q6ZVK1 233 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 FEZ1Q99689 392 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 AS3MTQ9HBK9 375 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 TSHZ2Q9NRE2 1034 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 WBP1LQ9NX94 342 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 RNF186Q9NXI6 227 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 ANAPC4Q9UJX5 808 aa9.32□□□□□ -0.92
CDC42-201ENST00000315554 PHIPQ8WWQ0 1821 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 A0A0G2JLL6 359 aaPredicted RBP9.31□□□□□ -0.92
CDC42-201ENST00000315554 TSPY2A6NKD2 308 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 CXCL11O14625 94 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 FOXN1O15353 648 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 RAD21O60216 631 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 TBC1D8O95759 1140 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 CYP21A2P08686 494 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 TSPY3P0CV98 308 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 TSPY8P0CW00 308 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 TM4SF4P48230 202 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 MAP2K1Q02750 393 aaPredicted RBP9.31□□□□□ -0.92
CDC42-201ENST00000315554 AKNAD1Q5T1N1 836 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 TREML2Q5T2D2 321 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 MFSD6Q6ZSS7 791 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 PRRT2Q7Z6L0 340 aaPredicted RBP9.31□□□□□ -0.92
CDC42-201ENST00000315554 SIAH1Q8IUQ4 282 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 MAP4K1Q92918 833 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 CCDC17Q96LX7 622 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 BEGAINQ9BUH8 593 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 WDR18Q9BV38 432 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 R3HDMLQ9H3Y0 253 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 ZNF287Q9HBT7 754 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 CTNNA3Q9UI47 895 aa9.31□□□□□ -0.92
CDC42-201ENST00000315554 MYH8P13535 1937 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 TESPA1A2RU30 521 aaPredicted RBP9.3□□□□□ -0.92
CDC42-201ENST00000315554 B4E1Z4 1266 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 USP17L10C9JJH3 530 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
CDC42-201ENST00000315554 EEF2P13639 858 aaKnown RBP9.3□□□□□ -0.92
CDC42-201ENST00000315554 BACE1P56817 501 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 KIAA1755Q5JYT7 1200 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 GPAT2Q6NUI2 795 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 STOX1Q6ZVD7 989 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 STAG1Q8WVM7 1258 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 CEP95Q96GE4 821 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 ZKSCAN3Q9BRR0 538 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 GINM1Q9NU53 330 aa9.3□□□□□ -0.92
CDC42-201ENST00000315554 IGKV6D-41A0A0C4DH26 115 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 PDHXO00330 501 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 SLC27A2O14975 620 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 ORC4O43929 436 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 KDM4AO75164 1064 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 CYP2C8P10632 490 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 TAF1CQ15572 869 aaPredicted RBP9.29□□□□□ -0.92
CDC42-201ENST00000315554 USP17L2Q6R6M4 530 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 SPICE1Q8N0Z3 855 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 LRRC47Q8N1G4 583 aaKnown RBP9.29□□□□□ -0.92
CDC42-201ENST00000315554 NEDD1Q8NHV4 660 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 RNF41Q9H4P4 317 aaPredicted RBP9.29□□□□□ -0.92
CDC42-201ENST00000315554 KANSL2Q9H9L4 492 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 EMILIN3Q9NT22 766 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 TMOD4Q9NZQ9 345 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 CLIP2Q9UDT6 1046 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 MTMR7Q9Y216 660 aa9.29□□□□□ -0.92
CDC42-201ENST00000315554 E7EWF7 191 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 FGRP09769 529 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 HSPA8P11142 646 aaKnown RBP9.28□□□□□ -0.92
CDC42-201ENST00000315554 INHBEP58166 350 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 CRHR2Q13324 411 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 COL9A3Q14050 684 aaPredicted RBP9.28□□□□□ -0.92
CDC42-201ENST00000315554 SH3D19Q5HYK7 790 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 OTUD7BQ6GQQ9 843 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms