RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ASPRV1Q53RT3 343 aa15.41■□□□□ 0.06
DDX54-202ENST00000314045 USP17L2Q6R6M4 530 aa15.41■□□□□ 0.06
DDX54-202ENST00000314045 CMA1P23946 247 aa15.41■□□□□ 0.06
DDX54-202ENST00000314045 SULF1Q8IWU6 871 aa15.41■□□□□ 0.06
DDX54-202ENST00000314045 MMRN2Q9H8L6 949 aa15.41■□□□□ 0.06
DDX54-202ENST00000314045 RTEL1Q9NZ71 1219 aa15.41■□□□□ 0.06
DDX54-202ENST00000314045 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.41■□□□□ 0.066e-7■■■■□ 19.3
DDX54-202ENST00000314045 POSTNQ15063 836 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 AOC3Q16853 763 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 NCAPH2Q6IBW4 605 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 CYB5R4Q7L1T6 521 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 FOXP4Q8IVH2 680 aaPredicted RBP15.4■□□□□ 0.06
DDX54-202ENST00000314045 SPAG5Q96R06 1193 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.4■□□□□ 0.06
DDX54-202ENST00000314045 NEDD4P46934 1319 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 ECE2O60344 883 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 USO1O60763 962 aaKnown RBP15.4■□□□□ 0.06
DDX54-202ENST00000314045 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
DDX54-202ENST00000314045 MB21D2Q8IYB1 491 aaPredicted RBP15.4■□□□□ 0.06
DDX54-202ENST00000314045 MLKLQ8NB16 471 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 GPT2Q8TD30 523 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 ZNF512BQ96KM6 892 aaPredicted RBP15.4■□□□□ 0.06
DDX54-202ENST00000314045 FOXP1Q9H334 677 aaPredicted RBP15.4■□□□□ 0.06
DDX54-202ENST00000314045 ACBD3Q9H3P7 528 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 SERTAD1Q9UHV2 236 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 AKR1B10O60218 316 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 TSGA10IPQ3SY00 556 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 HSP90B2PQ58FF3 399 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 NEK8Q86SG6 692 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 CABP7Q86V35 215 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 SLC44A5Q8NCS7 719 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 TAF4BQ92750 862 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 CLIC6Q96NY7 704 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 CBX8Q9HC52 389 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 PTGDRQ13258 359 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 NSUN4Q96CB9 384 aaKnown RBP15.4■□□□□ 0.06
DDX54-202ENST00000314045 TDRD3Q9H7E2 651 aaKnown RBP15.4■□□□□ 0.06
DDX54-202ENST00000314045 AS3MTQ9HBK9 375 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 MROH7-TTC4A0A0A0MT08 1334 aa15.4■□□□□ 0.06
DDX54-202ENST00000314045 POTEJP0CG39 1038 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 NR5A1Q13285 461 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 SLC39A14Q15043 492 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 UBE2Q2Q8WVN8 375 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 ATP6V0A2Q9Y487 856 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 ZNF609O15014 1411 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 KCTD1Q719H9 257 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 FNBP4Q8N3X1 1017 aaPredicted RBP15.39■□□□□ 0.05
DDX54-202ENST00000314045 ALAS1P13196 640 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 TCHPQ9BT92 498 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.39■□□□□ 0.05
DDX54-202ENST00000314045 IL25Q9H293 177 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 PNPLA7Q6ZV29 1317 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 TNS2Q63HR2 1409 aa15.39■□□□□ 0.05
DDX54-202ENST00000314045 KRT13P13646 458 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 SLC16A2P36021 539 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 NT5C2P49902 561 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 IRX3P78415 501 aaPredicted RBP15.38■□□□□ 0.05
DDX54-202ENST00000314045 STOX1Q6ZVD7 989 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 UBXN4Q92575 508 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 AMNQ9BXJ7 453 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 FTOQ9C0B1 505 aaKnown RBP eCLIP15.38■□□□□ 0.05
DDX54-202ENST00000314045 KIAA1468Q9P260 1216 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 UQCRHLA0A096LP55 91 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 UQCRHP07919 91 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 CTR9Q6PD62 1173 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 RASGRP4Q8TDF6 673 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 KIF1AQ12756 1690 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 NLRP12P59046 1061 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 DCPSQ96C86 337 aaKnown RBP15.38■□□□□ 0.05
DDX54-202ENST00000314045 SLC4A9Q96Q91 983 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 RCOR1Q9UKL0 485 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 CAMTA1Q9Y6Y1 1673 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 TRAF5O00463 557 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 PRPF3O43395 683 aaKnown RBP15.38■□□□□ 0.05
DDX54-202ENST00000314045 GYS1P13807 737 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 CASP7P55210 303 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
DDX54-202ENST00000314045 ZNF277Q9NRM2 450 aaPredicted RBP15.38■□□□□ 0.05
DDX54-202ENST00000314045 MRPL11Q9Y3B7 192 aaKnown RBP15.38■□□□□ 0.05
DDX54-202ENST00000314045 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 MIGA2Q7L4E1 593 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 GJB4Q9NTQ9 266 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 ZKSCAN5Q9Y2L8 839 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 DDX39AO00148 427 aaKnown RBP15.37■□□□□ 0.05
DDX54-202ENST00000314045 FLOT1O75955 427 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 PTGS1P23219 599 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 PPP1R2P41236 205 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 DYMQ7RTS9 669 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 PIGSQ96S52 555 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 MMP1P03956 469 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 UBXN1Q04323 297 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 PNOCQ13519 176 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 HERC4Q5GLZ8 1057 aaPredicted RBP15.37■□□□□ 0.05
DDX54-202ENST00000314045 CNNM4Q6P4Q7 775 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 POLR3EQ9NVU0 708 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 PCDHA12Q9UN75 941 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 DNM3Q9UQ16 869 aa15.37■□□□□ 0.05
DDX54-202ENST00000314045 PLEKHA8P1O95397 391 aa15.36■□□□□ 0.05
DDX54-202ENST00000314045 OR52Z1P0C646 297 aa15.36■□□□□ 0.05
DDX54-202ENST00000314045 NDUFA8P51970 172 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms