RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TDO2P48775 406 aa17.46■□□□□ 0.39
PPP1CA-201ENST00000312989 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
PPP1CA-201ENST00000312989 TICAM2Q86XR7 235 aa17.46■□□□□ 0.39
PPP1CA-201ENST00000312989 AMOTL1Q8IY63 956 aa17.46■□□□□ 0.39
PPP1CA-201ENST00000312989 SLAIN1Q8ND83 568 aa17.46■□□□□ 0.39
PPP1CA-201ENST00000312989 GTF3C2Q8WUA4 911 aaPredicted RBP17.46■□□□□ 0.39
PPP1CA-201ENST00000312989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
PPP1CA-201ENST00000312989 PLIN4Q96Q06 1357 aa17.45■□□□□ 0.38
PPP1CA-201ENST00000312989 ADCY3O60266 1144 aa17.45■□□□□ 0.38
PPP1CA-201ENST00000312989 NBPF11Q86T75 865 aa17.45■□□□□ 0.38
PPP1CA-201ENST00000312989 STK11IPQ8N1F8 1099 aa17.45■□□□□ 0.38
PPP1CA-201ENST00000312989 KANSL2Q9H9L4 492 aa17.45■□□□□ 0.38
PPP1CA-201ENST00000312989 HELLSQ9NRZ9 838 aa17.45■□□□□ 0.38
PPP1CA-201ENST00000312989 RABGAP1Q9Y3P9 1069 aa17.45■□□□□ 0.38
PPP1CA-201ENST00000312989 PRDM1O75626 825 aa17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 PPARAQ07869 468 aa17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 NMIQ13287 307 aaPredicted RBP17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 MORN1Q5T089 497 aa17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 SPICE1Q8N0Z3 855 aa17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 LPAR1Q92633 364 aa17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 PAGR1Q9BTK6 254 aa17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
PPP1CA-201ENST00000312989 INHAP05111 366 aa17.43■□□□□ 0.38
PPP1CA-201ENST00000312989 GPR142Q7Z601 462 aa17.43■□□□□ 0.38
PPP1CA-201ENST00000312989 COA7Q96BR5 231 aa17.43■□□□□ 0.38
PPP1CA-201ENST00000312989 ARHGEF10LQ9HCE6 1279 aa17.43■□□□□ 0.38
PPP1CA-201ENST00000312989 IGHA2P01877 340 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 APPP05067 770 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 FGRP09769 529 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 CCL5P13501 91 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 TRIM32Q13049 653 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 ALX1Q15699 326 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 UBE2Q1Q7Z7E8 422 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 NKX2-3Q8TAU0 364 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 TRIB2Q92519 343 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 NAPBQ9H115 298 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 NYAP2Q9P242 653 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 ANAPC4Q9UJX5 808 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 ADAMTS5Q9UNA0 930 aa17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 KIAA0100Q14667 2235 aaKnown RBP17.42■□□□□ 0.38
PPP1CA-201ENST00000312989 WDR46O15213 610 aaKnown RBP17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 MAPK4P31152 587 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 DSG3P32926 999 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 COG2Q14746 738 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 CEP95Q96GE4 821 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 NACAP1Q9BZK3 213 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 PAK6Q9NQU5 681 aaPredicted RBP17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 ZMYM6O95789 1325 aa17.41■□□□□ 0.38
PPP1CA-201ENST00000312989 GJB1P08034 283 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 SDSP20132 328 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 NOVP48745 357 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 MAP3K21Q5TCX8 1036 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 REPS2Q8NFH8 660 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 NEDD1Q8NHV4 660 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 MKL1Q969V6 931 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 ATG4CQ96DT6 458 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 IL25Q9H293 177 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 SH2D4AQ9H788 454 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 MKNK2Q9HBH9 465 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 DOCK3Q8IZD9 2030 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 FGAP02671 866 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 GJA8P48165 433 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 CTDSPL2Q05D32 466 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 FAM47AQ5JRC9 791 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 TMEM106CQ9BVX2 250 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 MOV10L1Q9BXT6 1211 aaKnown RBP17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 TANGO6Q9C0B7 1094 aa17.4■□□□□ 0.38
PPP1CA-201ENST00000312989 PARP14Q460N5 1801 aa17.39■□□□□ 0.38
PPP1CA-201ENST00000312989 CCDC171Q6TFL3 1326 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 MYH8P13535 1937 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 NDUFB10O96000 172 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 XRCC5P13010 732 aaKnown RBP17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 GRB14Q14449 540 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 CCL14Q16627 93 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 PLEKHH3Q7Z736 793 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 RILPL2Q969X0 211 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 NUP88Q99567 741 aaPredicted RBP17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 IL17RBQ9NRM6 502 aa17.39■□□□□ 0.37
PPP1CA-201ENST00000312989 F5H6K3 240 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 FLOT1O75955 427 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 HMGCRP04035 888 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 CYP2B6P20813 491 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 PTPREP23469 700 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 UBXN2AP68543 259 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 ATP2B2Q01814 1243 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 KLRC3Q07444 240 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 TMEM132BQ14DG7 1078 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 FAM83BQ5T0W9 1011 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 NUDT12Q9BQG2 462 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms