RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CAV1Q03135 178 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 ATP6V1AP38606 617 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 ZBTB17Q13105 803 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 KRT39Q6A163 491 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 ANKIB1Q9P2G1 1089 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 RNF40O75150 1001 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 LIFRP42702 1097 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 TNNI3KQ59H18 835 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 LPIN2Q92539 896 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 PBKQ96KB5 322 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 EYA3Q99504 573 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 FPGT-TNNI3KV9GXZ4 949 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 SSBP05455 408 aaKnown RBP eCLIP9.77□□□□□ -0.84
COL6A5-202ENST00000312481 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.84
COL6A5-202ENST00000312481 AOC3Q16853 763 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 SPATA1Q5VX52 437 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 FBXO18Q8NFZ0 1043 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 GOPCQ9HD26 462 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 STK17AQ9UEE5 414 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 USP42Q9H9J4 1324 aaKnown RBP9.77□□□□□ -0.84
COL6A5-202ENST00000312481 NEBLO76041 1014 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 NBPF20Q3BBV1 942 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 MORC4Q8TE76 937 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 TRMT1Q9NXH9 659 aaKnown RBP9.77□□□□□ -0.84
COL6A5-202ENST00000312481 HYOU1Q9Y4L1 999 aa9.77□□□□□ -0.84
COL6A5-202ENST00000312481 UBE4BO95155 1302 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 ANO9A1A5B4 782 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 MINDY4BA8MYZ0 360 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 LMNB1P20700 586 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 TTLL7Q6ZT98 887 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 NOSTRINQ8IVI9 506 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 CBX8Q9HC52 389 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 GTPBP6O43824 516 aaPredicted RBP9.77□□□□□ -0.85
COL6A5-202ENST00000312481 ZSCAN26Q16670 478 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 RIC8AQ9NPQ8 531 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 VPS18Q9P253 973 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 CDC23Q9UJX2 597 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 EXOC5O00471 708 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 ZHX3Q9H4I2 956 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 TXNDC16Q9P2K2 825 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 ATRIPQ8WXE1 791 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 IFIH1Q9BYX4 1025 aaKnown RBP9.77□□□□□ -0.85
COL6A5-202ENST00000312481 FGFR1OP2Q9NVK5 253 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 ATP6V0A2Q9Y487 856 aa9.77□□□□□ -0.85
COL6A5-202ENST00000312481 CCDC188H7C350 402 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 I3L4J1 428 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 RIOK3O14730 519 aaKnown RBP9.76□□□□□ -0.85
COL6A5-202ENST00000312481 ZCRB1Q8TBF4 217 aaKnown RBP9.76□□□□□ -0.85
COL6A5-202ENST00000312481 NLRP3Q96P20 1036 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 RLBP1P12271 317 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 LRRC63Q05C16 580 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 TBC1D8BQ0IIM8 1120 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 C8orf58Q8NAV2 365 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 PAIP2Q9BPZ3 127 aaKnown RBP9.76□□□□□ -0.85
COL6A5-202ENST00000312481 IQSEC2Q5JU85 1478 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 SLC9C2Q5TAH2 1124 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 MYSM1Q5VVJ2 828 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 OSBPL5Q9H0X9 879 aaPredicted RBP9.76□□□□□ -0.85
COL6A5-202ENST00000312481 GMNNO75496 209 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 ZNF853P0CG23 659 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 FOSBP53539 338 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 RCOR1Q9UKL0 485 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 SNX14Q9Y5W7 946 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 OVOS2A0A0J9YW53 1432 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 OVOS2Q6IE36 1432 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 IL2RBP14784 551 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 SLC8A3P57103 927 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 ILF2Q12905 390 aaKnown RBP9.76□□□□□ -0.85
COL6A5-202ENST00000312481 N4BP2Q86UW6 1770 aaPredicted RBP9.76□□□□□ -0.85
COL6A5-202ENST00000312481 NAPAP54920 295 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 ZBTB16Q05516 673 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 ZNF569Q5MCW4 686 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 MAP4K1Q92918 833 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 RSPH14Q9UHP6 348 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 A0A087WUV0 522 aaPredicted RBP9.76□□□□□ -0.85
COL6A5-202ENST00000312481 DNAJC8O75937 253 aaPredicted RBP9.76□□□□□ -0.85
COL6A5-202ENST00000312481 GFPT2O94808 682 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 FBXO41Q8TF61 875 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 LTN1O94822 1766 aa9.76□□□□□ -0.85
COL6A5-202ENST00000312481 ZNF790Q6PG37 636 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 PLEKHF1Q96S99 279 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 FOXP3Q9BZS1 431 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 DRC3Q9H069 523 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 IPO5O00410 1097 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 MPHOSPH10O00566 681 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 SMARCA5O60264 1052 aaPredicted RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 CCT2P78371 535 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 RNMTO43148 476 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 PARP1P09874 1014 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 P4HA1P13674 534 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 SLC39A14Q15043 492 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 RBSNQ9H1K0 784 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 TXLNGQ9NUQ3 528 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 PSD3Q9NYI0 1048 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 MAP2K2P36507 400 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 INF2Q27J81 1249 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 RIMS1Q86UR5 1692 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms