RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 GRM1Q13255 1194 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CDC37Q16543 378 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 RC3H1Q5TC82 1133 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 SPATA5Q8NB90 893 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 SLC7A3Q8WY07 619 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 BRF1Q92994 677 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TTC25Q96NG3 672 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ZNF219Q9P2Y4 722 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 NCOA3Q9Y6Q9 1424 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MYH11P35749 1972 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 STAT2P52630 851 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 SH3BGRP55822 239 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PLCB3Q01970 1234 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 NONOQ15233 471 aaKnown RBP eCLIP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 HADHQ16836 314 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MAATS1Q7Z4T9 603 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 RBM46Q8TBY0 533 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ZNF274Q96GC6 653 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MTA3Q9BTC8 594 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 BICC1Q9H694 974 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 SERPINB13Q9UIV8 391 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 BCS1LQ9Y276 419 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ZNF804BA4D1E1 1349 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 DISP3Q9P2K9 1392 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 F8W031 263 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 PDE8BO95263 885 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 PHKG2P15735 406 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 IRX4P78413 519 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 DNAJC21Q5F1R6 531 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 NBPF11Q86T75 865 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 C2CD5Q86YS7 1000 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 GLG1Q92896 1179 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 HOMER3Q9NSC5 361 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 DDAH1O94760 285 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 DDX5P17844 614 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 LMNB1P20700 586 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 MAN1A1P33908 653 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ARL1P40616 181 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 TNNI3KQ59H18 835 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 EP400NLQ6ZTU2 488 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 Q6ZUG5 572 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ARHGAP27Q6ZUM4 889 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ARMCX2Q7L311 632 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 SMC5Q8IY18 1101 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ZMYND15Q9H091 742 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 FPGT-TNNI3KV9GXZ4 949 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ERBB3P21860 1342 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 MYH9P35579 1960 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 PTPDC1A2A3K4 754 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 GPAA1O43292 621 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 TNNC2P02585 160 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ATP5JP18859 108 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 CCDC15Q0P6D6 951 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 BIRC3Q13489 604 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 COA1Q9GZY4 146 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 HESX1Q9UBX0 185 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 KDRP35968 1356 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 USP17L3A6NCW0 530 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 USP17L4A6NCW7 530 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 PDE4DQ08499 809 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 USP17L1Q7RTZ2 530 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 MAP7D3Q8IWC1 876 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 MRPL50Q8N5N7 158 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 RNF34Q969K3 372 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 MEIS3Q99687 375 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 TYW1Q9NV66 732 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 HSPA2P54652 639 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 EAPPQ56P03 285 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 AKNAD1Q5T1N1 836 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 OTUD6BQ8N6M0 293 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 MASTLQ96GX5 879 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 TMEM206Q9H813 350 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 FAM204AQ9H8W3 233 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 TSHZ2Q9NRE2 1034 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ANAPC4Q9UJX5 808 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 KCNH4Q9UQ05 1017 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 COL4A3BPQ9Y5P4 624 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 MYH10P35580 1976 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 LDHAP00338 332 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 POLR2MP0CAP2 368 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 GTF2F1P35269 517 aaKnown RBP eCLIP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 C10orf76Q5T2E6 689 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ADALQ6DHV7 355 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 DEPTORQ8TB45 409 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 FAM167AQ96KS9 214 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 TEKT3Q9BXF9 490 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 KIAA1586Q9HCI6 787 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 HERC5Q9UII4 1024 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 UTP11Q9Y3A2 253 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 UNC13BO14795 1591 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 CAPN9O14815 690 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 RGS12O14924 1447 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 ADGRB3O60242 1522 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 CUTAO60888 179 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 LIG1P18858 919 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 USP6P35125 1406 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 EIF2B5Q13144 721 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 SNW1Q13573 536 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 CREB3L3Q68CJ9 461 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms