RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ZNF76P36508 570 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 CTDSPL2Q05D32 466 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 SPAG1Q07617 926 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 PICALMQ13492 652 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 TMEM179Q6ZVK1 233 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 FAM160B2Q86V87 743 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 FAM114A1Q8IWE2 563 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 NSUN7Q8NE18 718 aaKnown RBP6.8□□□□□ -1.32
SEC22A-201ENST00000309934 DCP1AQ9NPI6 582 aaPredicted RBP6.8□□□□□ -1.32
SEC22A-201ENST00000309934 RTEL1Q9NZ71 1219 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 ECE2O60344 883 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 MYL1P05976 194 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 GCFC2P16383 781 aaKnown RBP6.8□□□□□ -1.32
SEC22A-201ENST00000309934 MFSD4BQ5TF39 518 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 FKBP1CQ5VVH2 108 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 APOBEC3FQ8IUX4 373 aaKnown RBP6.8□□□□□ -1.32
SEC22A-201ENST00000309934 PNMA1Q8ND90 353 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 CUEDC2Q9H467 287 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 BCL2L12Q9HB09 334 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 TJP1Q07157 1748 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 SHANK3Q9BYB0 1731 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 IRX5P78411 483 aaPredicted RBP6.8□□□□□ -1.32
SEC22A-201ENST00000309934 NBPF20Q3BBV1 942 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 KRT40Q6A162 431 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 ADALQ6DHV7 355 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 MAPKAPK5Q8IW41 473 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 NEDD1Q8NHV4 660 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 SMARCE1Q969G3 411 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 ZNRF3Q9ULT6 936 aa6.8□□□□□ -1.32
SEC22A-201ENST00000309934 C4BP0C0L5 1744 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 SCG2P13521 617 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 SYKP43405 635 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 CRKP46108 304 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 PABPC4Q13310 644 aaKnown RBP eCLIP6.79□□□□□ -1.32
SEC22A-201ENST00000309934 ADCK5Q3MIX3 580 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 SUPT20HL1Q3ZLR7 823 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 C12orf60Q5U649 245 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 DPY19L2Q6NUT2 758 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 SYNE4Q8N205 404 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 CNNM3Q8NE01 707 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 PICK1Q9NRD5 415 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 GTF2F1P35269 517 aaKnown RBP eCLIP6.79□□□□□ -1.32
SEC22A-201ENST00000309934 ADCY7P51828 1080 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 SCRN1Q12765 414 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
SEC22A-201ENST00000309934 NONOQ15233 471 aaKnown RBP eCLIP6.79□□□□□ -1.32
SEC22A-201ENST00000309934 CERKLQ49MI3 558 aaPredicted RBP6.79□□□□□ -1.32
SEC22A-201ENST00000309934 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 C10orf67Q8IYJ2 551 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 PPP2R3BQ9Y5P8 575 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 TOGARAM1Q9Y4F4 1720 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 SCN7AQ01118 1682 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 MAP2K2P36507 400 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 UBA7P41226 1012 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 AP1ARQ63HQ0 302 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 NOSTRINQ8IVI9 506 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 TRIML1Q8N9V2 468 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 IQUBQ8NA54 791 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 MAF1Q9H063 256 aa6.79□□□□□ -1.32
SEC22A-201ENST00000309934 TCRBV5S4A2TA0A5A2 114 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 SPDYE3A6NKU9 549 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 OFD1O75665 1012 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 IPO7O95373 1038 aaKnown RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 TUBB4AP04350 444 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 USP17L8P0C7I0 530 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 MNAT1P51948 309 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 FOSBP53539 338 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 GSDMDP57764 484 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 EN1Q05925 392 aaPredicted RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 GRM4Q14833 912 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 ZSCAN23Q3MJ62 389 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 MYSM1Q5VVJ2 828 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 HEATR3Q7Z4Q2 680 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 MCF2L2Q86YR7 1114 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 AK8Q96MA6 479 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 CTAGE1Q96RT6 745 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 TSG101Q99816 390 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 LRRC2Q9BYS8 371 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 F8W031 263 aaPredicted RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 XRCC6P12956 609 aaKnown RBP eCLIP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 COPB2P35606 906 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 DNM1Q05193 864 aaKnown RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 ABCB5Q2M3G0 1257 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 MSL1Q68DK7 614 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 C16orf86Q6ZW13 317 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 DIS3L2Q8IYB7 885 aaKnown RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 FAM200AQ8TCP9 573 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 LEO1Q8WVC0 666 aaPredicted RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 ANKS1AQ92625 1134 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 CLSTN2Q9H4D0 955 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 TMOD4Q9NZQ9 345 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 ZSWIM5Q9P217 1185 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 KIF2AO00139 706 aaPredicted RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 NBPF9Q3BBW0 867 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 ARL6IP4Q66PJ3 421 aaKnown RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 DTHD1Q6ZMT9 781 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 FMNL3Q8IVF7 1028 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms