RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PRDM10Q9NQV6 1147 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 DACH1Q9UI36 760 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
PTPN2-201ENST00000309660 ARAP2Q8WZ64 1704 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 COL22A1Q8NFW1 1626 aaPredicted RBP13.15□□□□□ -0.3
PTPN2-201ENST00000309660 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
PTPN2-201ENST00000309660 MLKLQ8NB16 471 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 DOCK2Q92608 1830 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
PTPN2-201ENST00000309660 C6orf229H3BNL8 230 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 ORC4O43929 436 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 BAG3O95817 575 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 PLCD1P51178 756 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 RGS22Q8NE09 1264 aa13.15□□□□□ -0.3
PTPN2-201ENST00000309660 NID2Q14112 1375 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
PTPN2-201ENST00000309660 GRAPQ13588 217 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
PTPN2-201ENST00000309660 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 ZNF579Q8NAF0 562 aaKnown RBP13.14□□□□□ -0.31
PTPN2-201ENST00000309660 PAGE5Q96GU1 130 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 DNAI1Q9UI46 699 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
PTPN2-201ENST00000309660 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
PTPN2-201ENST00000309660 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 MORC3Q14149 939 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 C12orf60Q5U649 245 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 INTS13Q9NVM9 706 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 MYH13Q9UKX3 1938 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 CACNA1SQ13698 1873 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 SLFN14P0C7P3 912 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 GPSM2P81274 684 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 NPY5RQ15761 445 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 XDHP47989 1333 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
PTPN2-201ENST00000309660 PES1O00541 588 aaKnown RBP13.12□□□□□ -0.31
PTPN2-201ENST00000309660 BTDP43251 543 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 PICALMQ13492 652 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 PFKFB3Q16875 520 aaPredicted RBP13.12□□□□□ -0.31
PTPN2-201ENST00000309660 FERMT2Q96AC1 680 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 DUOX1Q9NRD9 1551 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 TEX11Q8IYF3 940 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 LRRC4BQ9NT99 713 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 FGRP09769 529 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 CD44P16070 742 aaKnown RBP13.12□□□□□ -0.31
PTPN2-201ENST00000309660 CCT6AP40227 531 aaKnown RBP13.12□□□□□ -0.31
PTPN2-201ENST00000309660 EIF6P56537 245 aaKnown RBP13.12□□□□□ -0.31
PTPN2-201ENST00000309660 INF2Q27J81 1249 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 MFSD14BQ5SR56 506 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 RRAGBQ5VZM2 374 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 MED15Q96RN5 788 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 SYNRGQ9UMZ2 1314 aa13.12□□□□□ -0.31
PTPN2-201ENST00000309660 PP2D1A8MPX8 630 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 CTIFO43310 598 aaKnown RBP13.11□□□□□ -0.31
PTPN2-201ENST00000309660 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
PTPN2-201ENST00000309660 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 TEX33O43247 280 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 BMP15O95972 392 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 SARSP49591 514 aaKnown RBP13.11□□□□□ -0.31
PTPN2-201ENST00000309660 SBK1Q52WX2 424 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 IQUBQ8NA54 791 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 ENOX1Q8TC92 643 aaKnown RBP13.11□□□□□ -0.31
PTPN2-201ENST00000309660 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
PTPN2-201ENST00000309660 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
PTPN2-201ENST00000309660 LEMD3Q9Y2U8 911 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 BCORQ6W2J9 1755 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 RAD21O60216 631 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 GSTO1P78417 241 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
PTPN2-201ENST00000309660 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
PTPN2-201ENST00000309660 ELF2Q15723 593 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 SPECC1LQ69YQ0 1117 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
PTPN2-201ENST00000309660 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
PTPN2-201ENST00000309660 LDHCP07864 332 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 CUL4BQ13620 913 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 GGA1Q9UJY5 639 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 SERPINB2P05120 415 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 CALML3P27482 149 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 TXLNAP40222 546 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 STAT6P42226 847 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 EYA3Q99504 573 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms