RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 CRHR2Q13324 411 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 USP17L2Q6R6M4 530 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 POTEEQ6S8J3 1075 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 FASTKD5Q7L8L6 764 aaKnown RBP10.72□□□□□ -0.69
PDE4D-201ENST00000309641 ANKRD23Q86SG2 305 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 ENAHQ8N8S7 591 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-201ENST00000309641 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-201ENST00000309641 NCOA7Q8NI08 942 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 KCNB2Q92953 911 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 TCEANC2Q96MN5 208 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 KRT23Q9C075 422 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 VCPKMTQ9H867 229 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 CNNM2Q9H8M5 875 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 AGTPBP1Q9UPW5 1226 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 F5H6K3 240 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 KLRC3Q07444 240 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 TRDNQ13061 729 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 RALYLQ86SE5 291 aaKnown RBP10.72□□□□□ -0.69
PDE4D-201ENST00000309641 MKL1Q969V6 931 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 C12orf42Q96LP6 360 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 ZSCAN10Q96SZ4 725 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-201ENST00000309641 TMEM47Q9BQJ4 181 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 LRRC2Q9BYS8 371 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 TMOD4Q9NZQ9 345 aa10.72□□□□□ -0.69
PDE4D-201ENST00000309641 TNKSO95271 1327 aa10.71□□□□□ -0.69
PDE4D-201ENST00000309641 NDUFB10O96000 172 aa10.71□□□□□ -0.69
PDE4D-201ENST00000309641 SEC23AQ15436 765 aa10.71□□□□□ -0.69
PDE4D-201ENST00000309641 TAF1CQ15572 869 aaPredicted RBP10.71□□□□□ -0.69
PDE4D-201ENST00000309641 TSGA10IPQ3SY00 556 aa10.71□□□□□ -0.69
PDE4D-201ENST00000309641 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
PDE4D-201ENST00000309641 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
PDE4D-201ENST00000309641 ASCC2Q9H1I8 757 aaPredicted RBP10.71□□□□□ -0.69
PDE4D-201ENST00000309641 RPAP3Q9H6T3 665 aaPredicted RBP10.71□□□□□ -0.69
PDE4D-201ENST00000309641 FBXO28Q9NVF7 368 aa10.71□□□□□ -0.69
PDE4D-201ENST00000309641 USP14P54578 494 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 FAM83BQ5T0W9 1011 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 REM2Q8IYK8 340 aaPredicted RBP10.7□□□□□ -0.7
PDE4D-201ENST00000309641 IGDCC4Q8TDY8 1250 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 CA12O43570 354 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 PRC1O43663 620 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 ECM2O94769 699 aaPredicted RBP10.7□□□□□ -0.7
PDE4D-201ENST00000309641 ZKSCAN1P17029 563 aaPredicted RBP10.7□□□□□ -0.7
PDE4D-201ENST00000309641 MCCP23508 829 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 HOXA7P31268 230 aaPredicted RBP10.7□□□□□ -0.7
PDE4D-201ENST00000309641 CAP1Q01518 475 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
PDE4D-201ENST00000309641 JAKMIP1Q96N16 626 aaKnown RBP10.7□□□□□ -0.7
PDE4D-201ENST00000309641 P2RX7Q99572 595 aaKnown RBP10.7□□□□□ -0.7
PDE4D-201ENST00000309641 UBAC1Q9BSL1 405 aa10.7□□□□□ -0.7
PDE4D-201ENST00000309641 IFIT3O14879 490 aaKnown RBP10.69□□□□□ -0.7
PDE4D-201ENST00000309641 TOP1P11387 765 aaKnown RBP10.69□□□□□ -0.7
PDE4D-201ENST00000309641 OTUD7BQ6GQQ9 843 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 CATSPERGQ6ZRH7 1159 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 TTC14Q96N46 770 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 SH2D4AQ9H788 454 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 CPA4Q9UI42 421 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 RLFQ13129 1914 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 ADGRA2Q96PE1 1338 aa10.69□□□□□ -0.7
PDE4D-201ENST00000309641 EPB41L2O43491 1005 aaKnown RBP10.68□□□□□ -0.7
PDE4D-201ENST00000309641 ALDH1A1P00352 501 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 EXOSC10Q01780 885 aaKnown RBP10.68□□□□□ -0.7
PDE4D-201ENST00000309641 TMEM67Q5HYA8 995 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 SLFN13Q68D06 897 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 KCTD1Q719H9 257 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 GMCL1P1Q8NEA9 526 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 LPAR1Q92633 364 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 TXNRD2Q9NNW7 524 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L15C9J2P7 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L13C9JLJ4 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L11C9JVI0 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L18D6R9N7 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L22D6RA61 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L17D6RBQ6 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L19D6RCP7 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L20D6RJB6 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 WDR46O15213 610 aaKnown RBP10.68□□□□□ -0.7
PDE4D-201ENST00000309641 TLR2O60603 784 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 HSPA8P11142 646 aaKnown RBP10.68□□□□□ -0.7
PDE4D-201ENST00000309641 CASTP20810 708 aaKnown RBP10.68□□□□□ -0.7
PDE4D-201ENST00000309641 MCM5P33992 734 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 LBX1P52954 281 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 HERVK_113P62684 666 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 IRX3P78415 501 aaPredicted RBP10.68□□□□□ -0.7
PDE4D-201ENST00000309641 USP17L24Q0WX57 530 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 IFIT1BQ5T764 474 aaKnown RBP10.68□□□□□ -0.7
PDE4D-201ENST00000309641 TTBK2Q6IQ55 1244 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 MYL10Q9BUA6 226 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 UPF3BQ9BZI7 483 aaKnown RBP10.68□□□□□ -0.7
PDE4D-201ENST00000309641 CPVLQ9H3G5 476 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 LY9Q9HBG7 655 aa10.68□□□□□ -0.7
PDE4D-201ENST00000309641 ZFYVE28Q9HCC9 887 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms