RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LZTS2Q9BRK4 669 aa24.46■■□□□ 1.51
ATG4D-201ENST00000309469 SCN9AQ15858 1988 aa24.46■■□□□ 1.51
ATG4D-201ENST00000309469 YDJCA8MPS7 323 aa24.45■■□□□ 1.51
ATG4D-201ENST00000309469 NPY5RQ15761 445 aa24.45■■□□□ 1.51
ATG4D-201ENST00000309469 MTMR7Q9Y216 660 aa24.45■■□□□ 1.51
ATG4D-201ENST00000309469 MYO3BQ8WXR4 1341 aa24.45■■□□□ 1.5
ATG4D-201ENST00000309469 CUTAO60888 179 aa24.45■■□□□ 1.5
ATG4D-201ENST00000309469 VEGFAP15692 232 aaPredicted RBP24.45■■□□□ 1.5
ATG4D-201ENST00000309469 PSMD1Q99460 953 aa24.45■■□□□ 1.5
ATG4D-201ENST00000309469 MYH6P13533 1939 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 AKR1B1P15121 316 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 PFKFB1P16118 471 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 NLRP5P59047 1200 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 ZFPM1Q8IX07 1006 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 TNFRSF25Q93038 417 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 IDI2Q9BXS1 227 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 MTMR4Q9NYA4 1195 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 PCDHB6Q9Y5E3 794 aa24.44■■□□□ 1.5
ATG4D-201ENST00000309469 IGKV6D-41A0A0C4DH26 115 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 SLC35G1Q2M3R5 365 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 SHC4Q6S5L8 630 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 EHD4Q9H223 541 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 SH3GLB2Q9NR46 395 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 ZNF646O15015 1829 aaPredicted RBP24.43■■□□□ 1.5
ATG4D-201ENST00000309469 ZNF202O95125 648 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 SHMT1P34896 483 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 CACNB3P54284 484 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 ANO6Q4KMQ2 910 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 EARS2Q5JPH6 523 aaKnown RBP24.43■■□□□ 1.5
ATG4D-201ENST00000309469 KRI1Q8N9T8 703 aaKnown RBP24.43■■□□□ 1.5
ATG4D-201ENST00000309469 FAM200AQ8TCP9 573 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 CLIC6Q96NY7 704 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 SDF4Q9BRK5 362 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 DHX36Q9H2U1 1008 aaKnown RBP24.43■■□□□ 1.5
ATG4D-201ENST00000309469 CEP131Q9UPN4 1083 aa24.43■■□□□ 1.5
ATG4D-201ENST00000309469 FAM237AA0A1B0GTK4 181 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 FAM205CA6NFA0 338 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 KLRF2D3W0D1 207 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 CYTH3O43739 400 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 PARP1P09874 1014 aaKnown RBP24.42■■□□□ 1.5
ATG4D-201ENST00000309469 GOLGA8HP0CJ92 632 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 RESP18Q5W5W9 173 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 CCDC125Q86Z20 511 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 FAM198AQ9UFP1 575 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 HPSEQ9Y251 543 aa24.42■■□□□ 1.5
ATG4D-201ENST00000309469 NPM3O75607 178 aaKnown RBP24.41■■□□□ 1.5
ATG4D-201ENST00000309469 ATP2B1P20020 1258 aa24.41■■□□□ 1.5
ATG4D-201ENST00000309469 CALML3P27482 149 aa24.41■■□□□ 1.5
ATG4D-201ENST00000309469 TCP10Q12799 353 aa24.41■■□□□ 1.5
ATG4D-201ENST00000309469 NOL7Q9UMY1 257 aaKnown RBP24.41■■□□□ 1.5
ATG4D-201ENST00000309469 TRIM75PA6NK02 468 aa24.4■■□□□ 1.5
ATG4D-201ENST00000309469 PTPREP23469 700 aa24.4■■□□□ 1.5
ATG4D-201ENST00000309469 USP17L2Q6R6M4 530 aa24.4■■□□□ 1.5
ATG4D-201ENST00000309469 SPZ1Q9BXG8 430 aa24.4■■□□□ 1.5
ATG4D-201ENST00000309469 FBXO2Q9UK22 296 aaPredicted RBP24.4■■□□□ 1.5
ATG4D-201ENST00000309469 SMARCA1P28370 1054 aa24.39■■□□□ 1.5
ATG4D-201ENST00000309469 SYKP43405 635 aa24.39■■□□□ 1.5
ATG4D-201ENST00000309469 CFAP100Q494V2 611 aa24.39■■□□□ 1.5
ATG4D-201ENST00000309469 RASGRP2Q7LDG7 609 aa24.39■■□□□ 1.5
ATG4D-201ENST00000309469 LARGE2Q8N3Y3 721 aa24.39■■□□□ 1.5
ATG4D-201ENST00000309469 GPKOWQ92917 476 aaPredicted RBP eCLIP24.39■■□□□ 1.5
ATG4D-201ENST00000309469 MORC2Q9Y6X9 1032 aaPredicted RBP24.39■■□□□ 1.5
ATG4D-201ENST00000309469 ZBTB7AO95365 584 aa24.39■■□□□ 1.49
ATG4D-201ENST00000309469 CAVIN2O95810 425 aa24.39■■□□□ 1.49
ATG4D-201ENST00000309469 TIGD1Q96MW7 591 aa24.39■■□□□ 1.49
ATG4D-201ENST00000309469 ZNF277Q9NRM2 450 aaPredicted RBP24.39■■□□□ 1.49
ATG4D-201ENST00000309469 DDTLA6NHG4 134 aaPredicted RBP24.38■■□□□ 1.49
ATG4D-201ENST00000309469 USP17L5A8MUK1 530 aa24.38■■□□□ 1.49
ATG4D-201ENST00000309469 TGFB2P61812 414 aa24.38■■□□□ 1.49
ATG4D-201ENST00000309469 NOM1Q5C9Z4 860 aaKnown RBP24.38■■□□□ 1.49
ATG4D-201ENST00000309469 CCDC17Q96LX7 622 aa24.38■■□□□ 1.49
ATG4D-201ENST00000309469 VPS33BQ9H267 617 aa24.38■■□□□ 1.49
ATG4D-201ENST00000309469 CBX8Q9HC52 389 aa24.38■■□□□ 1.49
ATG4D-201ENST00000309469 PI4KBQ9UBF8 816 aa24.38■■□□□ 1.49
ATG4D-201ENST00000309469 USP25Q9UHP3 1055 aa24.38■■□□□ 1.49
ATG4D-201ENST00000309469 SRPRBQ9Y5M8 271 aaKnown RBP24.38■■□□□ 1.49
ATG4D-201ENST00000309469 TTLL1O95922 423 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 WWC2Q6AWC2 1192 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 RSBN1LQ6PCB5 846 aaPredicted RBP24.37■■□□□ 1.49
ATG4D-201ENST00000309469 SH3BP5LQ7L8J4 393 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 DNAJC25Q9H1X3 360 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 TDRD3Q9H7E2 651 aaKnown RBP24.37■■□□□ 1.49
ATG4D-201ENST00000309469 CLIP2Q9UDT6 1046 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 PDHBP11177 359 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 STX1AQ16623 288 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 SOGA3Q5TF21 947 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 BLIDQ8IZY5 108 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 ZNF579Q8NAF0 562 aaKnown RBP24.37■■□□□ 1.49
ATG4D-201ENST00000309469 PRMT6Q96LA8 375 aaPredicted RBP24.37■■□□□ 1.49
ATG4D-201ENST00000309469 RRAGDQ9NQL2 400 aaPredicted RBP24.37■■□□□ 1.49
ATG4D-201ENST00000309469 BARHL2Q9NY43 387 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 PCDHA4Q9UN74 947 aa24.37■■□□□ 1.49
ATG4D-201ENST00000309469 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.36■■□□□ 1.49
ATG4D-201ENST00000309469 VIL1P09327 827 aaKnown RBP24.36■■□□□ 1.49
ATG4D-201ENST00000309469 SLURP2P0DP57 97 aa24.36■■□□□ 1.49
ATG4D-201ENST00000309469 EIF6P56537 245 aaKnown RBP24.36■■□□□ 1.49
ATG4D-201ENST00000309469 TYW1BQ6NUM6 668 aa24.36■■□□□ 1.49
ATG4D-201ENST00000309469 HEATR3Q7Z4Q2 680 aa24.36■■□□□ 1.49
ATG4D-201ENST00000309469 ZSCAN29Q8IWY8 852 aaPredicted RBP24.36■■□□□ 1.49
ATG4D-201ENST00000309469 FAM177A1Q8N128 213 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms