RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PSEN1P49768 467 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 HUNKP57058 714 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 MAP3K9P80192 1104 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 EVX2Q03828 476 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 PRKG1Q13976 671 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
CHD6-201ENST00000309279 SDE2Q6IQ49 451 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.7□□□□□ -0.86
CHD6-201ENST00000309279 CREBRFQ8IUR6 639 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 PARP9Q8IXQ6 854 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 ANP32BQ92688 251 aaKnown RBP9.7□□□□□ -0.86
CHD6-201ENST00000309279 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.7□□□□□ -0.863e-24■■■■□ 25.3
CHD6-201ENST00000309279 FEZ2Q9UHY8 353 aaPredicted RBP9.7□□□□□ -0.86
CHD6-201ENST00000309279 CYP2D7A0A087X1C5 515 aa9.69□□□□□ -0.86
CHD6-201ENST00000309279 SMIM22K7EJ46 135 aa9.69□□□□□ -0.86
CHD6-201ENST00000309279 CTNND1O60716 968 aaKnown RBP9.69□□□□□ -0.86
CHD6-201ENST00000309279 NOL9Q5SY16 702 aaKnown RBP9.69□□□□□ -0.86
CHD6-201ENST00000309279 C16orf86Q6ZW13 317 aa9.69□□□□□ -0.86
CHD6-201ENST00000309279 SCYL1Q96KG9 808 aa9.69□□□□□ -0.86
CHD6-201ENST00000309279 WRNIP1Q96S55 665 aa9.69□□□□□ -0.86
CHD6-201ENST00000309279 SWAP70Q9UH65 585 aa9.69□□□□□ -0.86
CHD6-201ENST00000309279 ANAPC4Q9UJX5 808 aa9.69□□□□□ -0.86
CHD6-201ENST00000309279 TPX2Q9ULW0 747 aaKnown RBP9.69□□□□□ -0.86
CHD6-201ENST00000309279 ABT1Q9ULW3 272 aaKnown RBP9.69□□□□□ -0.86
CHD6-201ENST00000309279 MYH8P13535 1937 aa9.69□□□□□ -0.86
CHD6-201ENST00000309279 FAM196BA6NMK8 535 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 MINDY4BA8MYZ0 360 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 FGRP09769 529 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 VAMP1P23763 118 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 INPP5BP32019 993 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 SHMT1P34896 483 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 CAP2P40123 477 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 PTH1RQ03431 593 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 PPARAQ07869 468 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 RRP1BQ14684 758 aaKnown RBP9.68□□□□□ -0.86
CHD6-201ENST00000309279 SLC4A8Q2Y0W8 1093 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 DEFB115Q30KQ5 88 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 RGMBQ6NW40 437 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 CRACR2BQ8N4Y2 399 aaPredicted RBP9.68□□□□□ -0.86
CHD6-201ENST00000309279 MAP4K1Q92918 833 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 ZKSCAN4Q969J2 545 aaPredicted RBP9.68□□□□□ -0.86
CHD6-201ENST00000309279 DYNLL2Q96FJ2 89 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 CALR3Q96L12 384 aaKnown RBP9.68□□□□□ -0.86
CHD6-201ENST00000309279 VRTNQ9H8Y1 702 aa9.68□□□□□ -0.86
CHD6-201ENST00000309279 ATAD5Q96QE3 1844 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 CDK8P49336 464 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 HTRA3P83110 453 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 VGLL4Q14135 290 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 NPAS4Q8IUM7 802 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 CLMNQ96JQ2 1002 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 TRIM34Q9BYJ4 488 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 LSG1Q9H089 658 aaKnown RBP9.67□□□□□ -0.86
CHD6-201ENST00000309279 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 CTNNA3Q9UI47 895 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 CSADQ9Y600 493 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 SNCAIPQ9Y6H5 919 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 DOCK1Q14185 1865 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 LAMA4Q16363 1823 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 CCDC189A1A4V9 331 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 PUS10Q3MIT2 529 aaKnown RBP9.67□□□□□ -0.86
CHD6-201ENST00000309279 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 SCYL3Q8IZE3 742 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 SLC44A5Q8NCS7 719 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 CCDC102AQ96A19 550 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 SLC10A4Q96EP9 437 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 ZNF287Q9HBT7 754 aa9.67□□□□□ -0.86
CHD6-201ENST00000309279 PHIPQ8WWQ0 1821 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 SPDYE5A6NIY4 337 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 FAM155AB1AL88 458 aaPredicted RBP9.66□□□□□ -0.86
CHD6-201ENST00000309279 ZNF213O14771 459 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 SLC3A2P08195 630 aaKnown RBP9.66□□□□□ -0.86
CHD6-201ENST00000309279 ASNSP08243 561 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 PCP11498 1178 aaKnown RBP9.66□□□□□ -0.86
CHD6-201ENST00000309279 PTPRAP18433 802 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 ZNF157P51786 506 aaPredicted RBP9.66□□□□□ -0.86
CHD6-201ENST00000309279 JAG1P78504 1218 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 PDE4BQ07343 736 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 CERKLQ49MI3 558 aaPredicted RBP9.66□□□□□ -0.86
CHD6-201ENST00000309279 ERO1BQ86YB8 467 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 CCAR1Q8IX12 1150 aaKnown RBP9.66□□□□□ -0.86
CHD6-201ENST00000309279 DNAJC5GQ8N7S2 189 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 ATL2Q8NHH9 583 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 CCDC17Q96LX7 622 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
CHD6-201ENST00000309279 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHD6-201ENST00000309279 U3KPZ7 1027 aaPredicted RBP9.66□□□□□ -0.86
CHD6-201ENST00000309279 ORC4O43929 436 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 RECKO95980 971 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 SLC10A3P09131 477 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 ZBTB48P10074 688 aaPredicted RBP9.65□□□□□ -0.86
CHD6-201ENST00000309279 RASA1P20936 1047 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 ECE1P42892 770 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 IRX3P78415 501 aaPredicted RBP9.65□□□□□ -0.86
CHD6-201ENST00000309279 PPATQ06203 517 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 NECTIN1Q15223 517 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 IMMTQ16891 758 aaKnown RBP9.65□□□□□ -0.86
CHD6-201ENST00000309279 SPRYD7Q5W111 196 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 RASAL3Q86YV0 1011 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 STAG1Q8WVM7 1258 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms