RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KRT40Q6A162 431 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 CDC37L1Q7L3B6 337 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 IMPG2Q9BZV3 1241 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 HERC5Q9UII4 1024 aaKnown RBP10.46□□□□□ -0.73
PTPRE-202ENST00000306042 MED1Q15648 1581 aaPredicted RBP10.46□□□□□ -0.73
PTPRE-202ENST00000306042 NT5C2P49902 561 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 DNM1Q05193 864 aaKnown RBP10.46□□□□□ -0.73
PTPRE-202ENST00000306042 CALCRLQ16602 461 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 ATG9AQ7Z3C6 839 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 SPC24Q8NBT2 197 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 MMRN2Q9H8L6 949 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 MYOZ2Q9NPC6 264 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 HOXC10Q9NYD6 342 aa10.46□□□□□ -0.73
PTPRE-202ENST00000306042 SYCE3A1L190 88 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 NEBLO76041 1014 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 FOSP01100 380 aaPredicted RBP10.46□□□□□ -0.74
PTPRE-202ENST00000306042 SLC16A2P36021 539 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 SSR1P43307 286 aaKnown RBP10.46□□□□□ -0.74
PTPRE-202ENST00000306042 HUNKP57058 714 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 ISM2Q6H9L7 571 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 COA7Q96BR5 231 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 UIMC1Q96RL1 719 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 LRWD1Q9UFC0 647 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 CCDC169A6NNP5 214 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 SCG2P13521 617 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 RASSF7Q02833 373 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 PTF1AQ7RTS3 328 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 TRPC6Q9Y210 931 aa10.46□□□□□ -0.74
PTPRE-202ENST00000306042 PSMA7O14818 248 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 SEC24BO95487 1268 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 SYDE2Q5VT97 1194 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 SV2BQ7L1I2 683 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 TICAM2Q86XR7 235 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 TRIM6Q9C030 488 aaPredicted RBP10.45□□□□□ -0.74
PTPRE-202ENST00000306042 ZHX1Q9UKY1 873 aaPredicted RBP10.45□□□□□ -0.74
PTPRE-202ENST00000306042 CYP21A2P08686 494 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
PTPRE-202ENST00000306042 FASTKD5Q7L8L6 764 aaKnown RBP10.45□□□□□ -0.74
PTPRE-202ENST00000306042 LRRC4BQ9NT99 713 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 PUF60Q9UHX1 559 aaKnown RBP10.45□□□□□ -0.74
PTPRE-202ENST00000306042 DAGLAQ9Y4D2 1042 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 RGL2O15211 777 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 CELF2O95319 508 aaKnown RBP10.45□□□□□ -0.74
PTPRE-202ENST00000306042 MIER3Q7Z3K6 550 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 CAGE1Q8TC20 777 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 UTYO14607 1347 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 SYT1P21579 422 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 CCDC65Q8IXS2 484 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 BLIDQ8IZY5 108 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
PTPRE-202ENST00000306042 ELP3Q9H9T3 547 aa10.45□□□□□ -0.74
PTPRE-202ENST00000306042 DCP1AQ9NPI6 582 aaPredicted RBP10.45□□□□□ -0.74
PTPRE-202ENST00000306042 ZMYM6O95789 1325 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 SEPT2Q15019 361 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 ENOX2Q16206 610 aaKnown RBP10.44□□□□□ -0.74
PTPRE-202ENST00000306042 PRR16Q569H4 304 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 ATL3Q6DD88 541 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 HHIPL2Q6UWX4 724 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 SNX29Q8TEQ0 813 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 ZNF70Q9UC06 446 aaPredicted RBP10.44□□□□□ -0.74
PTPRE-202ENST00000306042 KIF4AO95239 1232 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 CYP2D6P10635 497 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 HARSP12081 509 aaKnown RBP10.44□□□□□ -0.74
PTPRE-202ENST00000306042 MXD3Q9BW11 206 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 MRVI1Q9Y6F6 885 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 CCP110O43303 1012 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 EPHX2P34913 555 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 FILIP1Q7Z7B0 1213 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 PI4K2BQ8TCG2 481 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 GTPBP4Q9BZE4 634 aaKnown RBP10.44□□□□□ -0.74
PTPRE-202ENST00000306042 ADARB2Q9NS39 739 aaKnown RBP10.44□□□□□ -0.74
PTPRE-202ENST00000306042 SORBS3O60504 671 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 IGSF3O75054 1194 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 STRN3Q13033 797 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 GALNT17Q6IS24 598 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 OTUD6AQ7L8S5 288 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 TTC14Q96N46 770 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
PTPRE-202ENST00000306042 DNM3Q9UQ16 869 aa10.44□□□□□ -0.74
PTPRE-202ENST00000306042 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
PTPRE-202ENST00000306042 ZEB2O60315 1214 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 DDR1Q08345 913 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 STX1AQ16623 288 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 PLA2G4DQ86XP0 818 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 FERMT2Q96AC1 680 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 LSG1Q9H089 658 aaKnown RBP10.43□□□□□ -0.74
PTPRE-202ENST00000306042 SERPINA10Q9UK55 444 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 ABCC12Q96J65 1359 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 NEMFO60524 1076 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 CCDC181Q5TID7 509 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 ELMSAN1Q6PJG2 1045 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 NSUN4Q96CB9 384 aaKnown RBP10.43□□□□□ -0.74
PTPRE-202ENST00000306042 FBXO40Q9UH90 709 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 TAF1CQ15572 869 aaPredicted RBP10.43□□□□□ -0.74
PTPRE-202ENST00000306042 UTP14CQ5TAP6 766 aaKnown RBP10.43□□□□□ -0.74
PTPRE-202ENST00000306042 METTL13Q8N6R0 699 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 ADGRB2O60241 1585 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms