RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 A0A1W2PRG0 241 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 GSG1L2A8MUP6 293 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 M0R2C6 588 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 RAD21O60216 631 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 HMGCRP04035 888 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 GJB1P08034 283 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 CYP2B6P20813 491 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 GJA8P48165 433 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 GIMAP6Q6P9H5 292 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 CLEC10AQ8IUN9 316 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
HMGN1P35-201ENST00000303758 GREB1LQ9C091 1923 aaPredicted RBP13□□□□□ -0.33
HMGN1P35-201ENST00000303758 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 RGS2P41220 211 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 Q3C1V9 767 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 GPR142Q7Z601 462 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 PLEKHH3Q7Z736 793 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 U2AF1L4Q8WU68 220 aaKnown RBP12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 LPAR1Q92633 364 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 PORCNQ9H237 461 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 RWDD1Q9H446 243 aaPredicted RBP12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 ZNF287Q9HBT7 754 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 IVNS1ABPQ9Y6Y0 642 aa12.99□□□□□ -0.33
HMGN1P35-201ENST00000303758 ROBO3Q96MS0 1386 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 COL11A1P12107 1806 aaPredicted RBP12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 FLOT1O75955 427 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 TFRCP02786 760 aaKnown RBP12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 COG2Q14746 738 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 LBX2Q6XYB7 198 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 TRMT44Q8IYL2 757 aaKnown RBP12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 SPICE1Q8N0Z3 855 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 SEC62Q99442 399 aaKnown RBP12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 NAPBQ9H115 298 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 GOPCQ9HD26 462 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 HOXC10Q9NYD6 342 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 GJD2Q9UKL4 321 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 TMX2Q9Y320 296 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 RLFQ13129 1914 aa12.98□□□□□ -0.33
HMGN1P35-201ENST00000303758 SALL3Q9BXA9 1300 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 PATL2C9JE40 543 aaKnown RBP12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 WDR46O15213 610 aaKnown RBP12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 CNMDO75829 334 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 FARP2O94887 1054 aaPredicted RBP12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 SGPL1O95470 568 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 EEF2P13639 858 aaKnown RBP12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 IFNL3Q8IZI9 196 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 TRIB2Q92519 343 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 APBA2Q99767 749 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 LNPKQ9C0E8 428 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 EPB41L4AQ9HCS5 686 aaPredicted RBP12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 ZNF236Q9UL36 1845 aa12.97□□□□□ -0.33
HMGN1P35-201ENST00000303758 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 XRCC5P13010 732 aaKnown RBP12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 CAPN2P17655 700 aa12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 PDE1AP54750 535 aa12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 PDE4BQ07343 736 aa12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 PLS1Q14651 629 aa12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 ZMYM1Q5SVZ6 1142 aa12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 ZNF444Q8N0Y2 327 aaPredicted RBP12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 HTATIP2Q9BUP3 242 aa12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 PAK6Q9NQU5 681 aaPredicted RBP12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 BTBD7Q9P203 1132 aa12.96□□□□□ -0.33
HMGN1P35-201ENST00000303758 FRMPD3Q5JV73 1810 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 RPTORQ8N122 1335 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 PRDM1O75626 825 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 RASA1P20936 1047 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 TRIM32Q13049 653 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 MORN1Q5T089 497 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 POTEEQ6S8J3 1075 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 MB21D1Q8N884 522 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 DPF3Q92784 378 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 STAP2Q9UGK3 403 aa12.95□□□□□ -0.34
HMGN1P35-201ENST00000303758 SLC15A5A6NIM6 579 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 TSPY3P0CV98 308 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 TSPY8P0CW00 308 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 PTPREP23469 700 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 CCDC129Q6ZRS4 1044 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 SIAH1Q8IUQ4 282 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 ATG4CQ96DT6 458 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
HMGN1P35-201ENST00000303758 PPARAQ07869 468 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms