RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 MORC3Q14149 939 aa13.59□□□□□ -0.23
PDGFD-201ENST00000302251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
PDGFD-201ENST00000302251 RGPD2P0DJD1 1756 aa13.59□□□□□ -0.23
PDGFD-201ENST00000302251 LETM2Q2VYF4 491 aa13.59□□□□□ -0.23
PDGFD-201ENST00000302251 DZIP1Q86YF9 867 aaKnown RBP13.59□□□□□ -0.23
PDGFD-201ENST00000302251 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
PDGFD-201ENST00000302251 KIF5BP33176 963 aa13.59□□□□□ -0.23
PDGFD-201ENST00000302251 TUBB2AQ13885 445 aa13.59□□□□□ -0.23
PDGFD-201ENST00000302251 TUBB2BQ9BVA1 445 aa13.59□□□□□ -0.23
PDGFD-201ENST00000302251 MED4Q9NPJ6 270 aa13.59□□□□□ -0.23
PDGFD-201ENST00000302251 FGFR1OPO95684 399 aaKnown RBP13.58□□□□□ -0.24
PDGFD-201ENST00000302251 EZRP15311 586 aaKnown RBP13.58□□□□□ -0.24
PDGFD-201ENST00000302251 CALRP27797 417 aaKnown RBP13.58□□□□□ -0.24
PDGFD-201ENST00000302251 VSNL1P62760 191 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 B4GALNT4Q76KP1 1039 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 SMARCC2Q8TAQ2 1214 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 FRMD3A2A2Y4 597 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 PPFIA1Q13136 1202 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 SHC4Q6S5L8 630 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
PDGFD-201ENST00000302251 CABS1Q96KC9 395 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 IFIH1Q9BYX4 1025 aaKnown RBP13.58□□□□□ -0.24
PDGFD-201ENST00000302251 ZMYM6O95789 1325 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
PDGFD-201ENST00000302251 PTGDRQ13258 359 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 MSL1Q68DK7 614 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 DYMQ7RTS9 669 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 SDR42E1Q8WUS8 393 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 PARP3Q9Y6F1 533 aa13.58□□□□□ -0.24
PDGFD-201ENST00000302251 CTDNEP1O95476 244 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 C2orf54Q08AI8 447 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 ICE2Q659A1 982 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 RRAGAQ7L523 313 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 ZNF654Q8IZM8 581 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 ENOX1Q8TC92 643 aaKnown RBP13.57□□□□□ -0.24
PDGFD-201ENST00000302251 DCAF5Q96JK2 942 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.57□□□□□ -0.24
PDGFD-201ENST00000302251 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
PDGFD-201ENST00000302251 MAGEB6P1A0A0J9YX57 407 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 PPP6R2O75170 966 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 RAPGEF1Q13905 1077 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 AKNAD1Q5T1N1 836 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 FANCBQ8NB91 859 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 PYM1Q9BRP8 204 aaKnown RBP13.57□□□□□ -0.24
PDGFD-201ENST00000302251 MRPL44Q9H9J2 332 aaKnown RBP13.57□□□□□ -0.24
PDGFD-201ENST00000302251 ZNF446Q9NWS9 450 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 COPB1P53618 953 aaKnown RBP13.57□□□□□ -0.24
PDGFD-201ENST00000302251 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
PDGFD-201ENST00000302251 CTNNBL1Q8WYA6 563 aaPredicted RBP13.57□□□□□ -0.24
PDGFD-201ENST00000302251 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
PDGFD-201ENST00000302251 GSTTP1A0A1W2PQM5 241 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 SLIT1O75093 1534 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 UBE4AQ14139 1066 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 VPS36Q86VN1 386 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 MYCBPQ99417 103 aaPredicted RBP13.56□□□□□ -0.24
PDGFD-201ENST00000302251 JPH2Q9BR39 696 aaPredicted RBP13.56□□□□□ -0.24
PDGFD-201ENST00000302251 HAUS4Q9H6D7 363 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 LTN1O94822 1766 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 ANKRD62A6NC57 917 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 H2AFXP16104 143 aaPredicted RBP13.56□□□□□ -0.24
PDGFD-201ENST00000302251 TMEM266Q2M3C6 531 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 SRLQ86TD4 932 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 ENGASEQ8NFI3 743 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 SNAP23O00161 211 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 TRAF5O00463 557 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 TBC1D8O95759 1140 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 PDE6AP16499 860 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 PDE4BQ07343 736 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 IFNL3Q8IZI9 196 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 SIRT1Q96EB6 747 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 ZSWIM5Q9P217 1185 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 ADGRG1Q9Y653 693 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 ARHGAP23Q9P227 1491 aa13.56□□□□□ -0.24
PDGFD-201ENST00000302251 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 NAPAP54920 295 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 IFT88Q13099 833 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 CEP85LQ5SZL2 805 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 PAIP2Q9BPZ3 127 aaKnown RBP13.55□□□□□ -0.24
PDGFD-201ENST00000302251 BAIAP2L1Q9UHR4 511 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 B4DLN1 442 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 PRKAB2O43741 272 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 TFRCP02786 760 aaKnown RBP13.55□□□□□ -0.24
PDGFD-201ENST00000302251 TRIM14Q14142 442 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 SEPT7Q16181 437 aaKnown RBP13.55□□□□□ -0.24
PDGFD-201ENST00000302251 CCDC25Q86WR0 208 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 MAGEA9P43362 315 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 FMR1Q06787 632 aaKnown RBP eCLIP13.55□□□□□ -0.24
PDGFD-201ENST00000302251 KIAA0753Q2KHM9 967 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 L2HGDHQ9H9P8 463 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
PDGFD-201ENST00000302251 FDPSP14324 419 aaKnown RBP13.54□□□□□ -0.24
PDGFD-201ENST00000302251 PHKA1P46020 1223 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 USP49Q70CQ1 688 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 METTL16Q86W50 562 aaKnown RBP13.54□□□□□ -0.24
PDGFD-201ENST00000302251 ARFGAP2Q8N6H7 521 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms