RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 NPY5RQ15761 445 aa27.39■■□□□ 1.98
FOXA3-201ENST00000302177 ZNF827Q17R98 1081 aa27.39■■□□□ 1.98
FOXA3-201ENST00000302177 EARS2Q5JPH6 523 aaKnown RBP27.39■■□□□ 1.98
FOXA3-201ENST00000302177 SYMPKQ92797 1274 aaKnown RBP27.39■■□□□ 1.98
FOXA3-201ENST00000302177 EPSTI1Q96J88 318 aa27.39■■□□□ 1.98
FOXA3-201ENST00000302177 CRNKL1Q9BZJ0 848 aaKnown RBP27.39■■□□□ 1.98
FOXA3-201ENST00000302177 VWA3AA6NCI4 1184 aa27.39■■□□□ 1.97
FOXA3-201ENST00000302177 CUL4BQ13620 913 aa27.39■■□□□ 1.97
FOXA3-201ENST00000302177 TTC38Q5R3I4 469 aa27.39■■□□□ 1.97
FOXA3-201ENST00000302177 PANX2Q96RD6 677 aa27.39■■□□□ 1.97
FOXA3-201ENST00000302177 CNTNAP5Q8WYK1 1306 aa27.38■■□□□ 1.97
FOXA3-201ENST00000302177 A0A087X0B3 334 aa27.38■■□□□ 1.97
FOXA3-201ENST00000302177 FAM205CA6NFA0 338 aa27.38■■□□□ 1.97
FOXA3-201ENST00000302177 SMIM22K7EJ46 135 aa27.38■■□□□ 1.97
FOXA3-201ENST00000302177 TPM1P09493 284 aa27.38■■□□□ 1.97
FOXA3-201ENST00000302177 C3orf67Q6ZVT6 689 aa27.38■■□□□ 1.97
FOXA3-201ENST00000302177 TRMT44Q8IYL2 757 aaKnown RBP27.38■■□□□ 1.97
FOXA3-201ENST00000302177 ANKRD2Q9GZV1 360 aa27.38■■□□□ 1.97
FOXA3-201ENST00000302177 MYH2Q9UKX2 1941 aa27.37■■□□□ 1.97
FOXA3-201ENST00000302177 CYP2D7A0A087X1C5 515 aa27.37■■□□□ 1.97
FOXA3-201ENST00000302177 ERCC6LQ2NKX8 1250 aa27.37■■□□□ 1.97
FOXA3-201ENST00000302177 KRT222Q8N1A0 295 aa27.37■■□□□ 1.97
FOXA3-201ENST00000302177 NAA15Q9BXJ9 866 aaKnown RBP27.37■■□□□ 1.97
FOXA3-201ENST00000302177 ARPP21Q9UBL0 812 aaPredicted RBP27.37■■□□□ 1.97
FOXA3-201ENST00000302177 PRDM1O75626 825 aa27.37■■□□□ 1.97
FOXA3-201ENST00000302177 CDKAL1Q5VV42 579 aa27.37■■□□□ 1.97
FOXA3-201ENST00000302177 APTXQ7Z2E3 356 aaKnown RBP27.37■■□□□ 1.97
FOXA3-201ENST00000302177 DCP1AQ9NPI6 582 aaPredicted RBP27.37■■□□□ 1.97
FOXA3-201ENST00000302177 NYXQ9GZU5 481 aa27.36■■□□□ 1.97
FOXA3-201ENST00000302177 EFCAB8A8MWE9 144 aa27.35■■□□□ 1.97
FOXA3-201ENST00000302177 SCG2P13521 617 aa27.35■■□□□ 1.97
FOXA3-201ENST00000302177 RPS8P62241 208 aaKnown RBP27.35■■□□□ 1.97
FOXA3-201ENST00000302177 MECOMQ03112 1051 aa27.35■■□□□ 1.97
FOXA3-201ENST00000302177 GOLGA8FQ08AF8 430 aa27.35■■□□□ 1.97
FOXA3-201ENST00000302177 GOLGA8DPQ0D2H9 430 aa27.35■■□□□ 1.97
FOXA3-201ENST00000302177 SRBD1Q8N5C6 995 aaKnown RBP27.35■■□□□ 1.97
FOXA3-201ENST00000302177 IQUBQ8NA54 791 aa27.35■■□□□ 1.97
FOXA3-201ENST00000302177 CELF1Q92879 486 aaKnown RBP27.35■■□□□ 1.97
FOXA3-201ENST00000302177 PARP3Q9Y6F1 533 aa27.35■■□□□ 1.97
FOXA3-201ENST00000302177 AKR1B15C9JRZ8 316 aaPredicted RBP27.35■■□□□ 1.97
FOXA3-201ENST00000302177 PFKFB3Q16875 520 aaPredicted RBP27.35■■□□□ 1.97
FOXA3-201ENST00000302177 UBXN4Q92575 508 aa27.35■■□□□ 1.97
FOXA3-201ENST00000302177 WTIPA6NIX2 430 aaPredicted RBP27.34■■□□□ 1.97
FOXA3-201ENST00000302177 HIBADHP31937 336 aaKnown RBP27.34■■□□□ 1.97
FOXA3-201ENST00000302177 PBX1P40424 430 aa27.34■■□□□ 1.97
FOXA3-201ENST00000302177 AFMP43652 599 aa27.34■■□□□ 1.97
FOXA3-201ENST00000302177 PTGDRQ13258 359 aa27.34■■□□□ 1.97
FOXA3-201ENST00000302177 ZNF174Q15697 407 aa27.34■■□□□ 1.97
FOXA3-201ENST00000302177 HSP90AA4PQ58FG1 418 aa27.34■■□□□ 1.97
FOXA3-201ENST00000302177 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
FOXA3-201ENST00000302177 SYNRGQ9UMZ2 1314 aa27.34■■□□□ 1.97
FOXA3-201ENST00000302177 BAZ2AQ9UIF9 1905 aaKnown RBP27.34■■□□□ 1.97
FOXA3-201ENST00000302177 PPP1R3GB7ZBB8 358 aa27.33■■□□□ 1.97
FOXA3-201ENST00000302177 URI1O94763 535 aaPredicted RBP27.33■■□□□ 1.97
FOXA3-201ENST00000302177 ADKP55263 362 aaKnown RBP27.33■■□□□ 1.97
FOXA3-201ENST00000302177 BMS1Q14692 1282 aaKnown RBP27.33■■□□□ 1.97
FOXA3-201ENST00000302177 FILIP1LQ4L180 1135 aa27.33■■□□□ 1.97
FOXA3-201ENST00000302177 MNS1Q8NEH6 495 aa27.33■■□□□ 1.97
FOXA3-201ENST00000302177 UPF1Q92900 1129 aaKnown RBP eCLIP27.33■■□□□ 1.971e-6■■■■□ 22.2
FOXA3-201ENST00000302177 ADD3Q9UEY8 706 aaKnown RBP27.33■■□□□ 1.97
FOXA3-201ENST00000302177 CALML3P27482 149 aa27.33■■□□□ 1.97
FOXA3-201ENST00000302177 GTF2E1P29083 439 aaPredicted RBP27.33■■□□□ 1.97
FOXA3-201ENST00000302177 CASQ1P31415 396 aa27.33■■□□□ 1.97
FOXA3-201ENST00000302177 KIF5BP33176 963 aa27.33■■□□□ 1.97
FOXA3-201ENST00000302177 E2F4Q16254 413 aa27.33■■□□□ 1.97
FOXA3-201ENST00000302177 ARL6IP4Q66PJ3 421 aaKnown RBP27.33■■□□□ 1.97
FOXA3-201ENST00000302177 SH3GLB2Q9NR46 395 aa27.33■■□□□ 1.97
FOXA3-201ENST00000302177 hCG_1642624A0A1W2PR95 340 aa27.32■■□□□ 1.96
FOXA3-201ENST00000302177 CD44P16070 742 aaKnown RBP27.32■■□□□ 1.96
FOXA3-201ENST00000302177 NLRP5P59047 1200 aa27.32■■□□□ 1.96
FOXA3-201ENST00000302177 MAP3K9P80192 1104 aa27.32■■□□□ 1.96
FOXA3-201ENST00000302177 PKNOX2Q96KN3 472 aa27.32■■□□□ 1.96
FOXA3-201ENST00000302177 NLRP3Q96P20 1036 aa27.32■■□□□ 1.96
FOXA3-201ENST00000302177 KIF20AO95235 890 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 PPFIBP1Q86W92 1011 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 LINC00116Q8NCU8 138 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 CCDC51Q96ER9 411 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 ARGLU1Q9NWB6 273 aaPredicted RBP27.31■■□□□ 1.96
FOXA3-201ENST00000302177 ITIH6Q6UXX5 1313 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 LRRC10BA6NIK2 292 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 FANCGO15287 622 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 TADA3O75528 432 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 PTPN21Q16825 1174 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 ARHGAP29Q52LW3 1261 aa27.31■■□□□ 1.96
FOXA3-201ENST00000302177 WNT7AO00755 349 aa27.3■■□□□ 1.96
FOXA3-201ENST00000302177 SPTY2D1Q68D10 685 aaPredicted RBP27.3■■□□□ 1.96
FOXA3-201ENST00000302177 ANKS1AQ92625 1134 aa27.3■■□□□ 1.96
FOXA3-201ENST00000302177 LAMB1P07942 1786 aa27.3■■□□□ 1.96
FOXA3-201ENST00000302177 CCDC175P0C221 793 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 GNG11P61952 73 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 FAM193AP78312 1265 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 TOGARAM2Q6ZUX3 1019 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 DGKHQ86XP1 1220 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 LRRN4CLQ8ND94 238 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 GTPBP6O43824 516 aaPredicted RBP27.29■■□□□ 1.96
FOXA3-201ENST00000302177 CCDC178Q5BJE1 867 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 RC3H1Q5TC82 1133 aaKnown RBP27.29■■□□□ 1.96
FOXA3-201ENST00000302177 IGSF22Q8N9C0 903 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 ZNF446Q9NWS9 450 aa27.29■■□□□ 1.96
FOXA3-201ENST00000302177 CASZ1Q86V15 1759 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms