RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 FCHSD1Q86WN1 690 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 FMR1NBQ8N0W7 255 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-201ENST00000301981 SECISBP2LQ93073 1101 aaKnown RBP8.62□□□□□ -1.03
LRRC28-201ENST00000301981 HPS3Q969F9 1004 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 KANSL2Q9H9L4 492 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 E7EVH7 732 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 CEP104O60308 925 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 TCP10Q12799 353 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 USH1GQ495M9 461 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 CPLX4Q7Z7G2 160 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 DPH5Q9H2P9 285 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 KCNK9Q9NPC2 374 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 USP6P35125 1406 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 MOCS3O95396 460 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 ABCB4P21439 1286 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 GBP2P32456 591 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-201ENST00000301981 RRP15Q9Y3B9 282 aaKnown RBP8.62□□□□□ -1.03
LRRC28-201ENST00000301981 CTDNEP1O95476 244 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 RASSF7Q02833 373 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 DYNLL2Q96FJ2 89 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 TMEM87BQ96K49 555 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 CAPN7Q9Y6W3 813 aa8.62□□□□□ -1.03
LRRC28-201ENST00000301981 IRX5P78411 483 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-201ENST00000301981 AMPD3Q01432 767 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
LRRC28-201ENST00000301981 MKRN4PQ13434 485 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-201ENST00000301981 SHC4Q6S5L8 630 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 TACO1Q9BSH4 297 aaKnown RBP8.61□□□□□ -1.03
LRRC28-201ENST00000301981 COPRSQ9NQ92 184 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 SAR1BQ9Y6B6 198 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 NCOA3Q9Y6Q9 1424 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 ZCCHC11Q5TAX3 1644 aaKnown RBP8.61□□□□□ -1.03
LRRC28-201ENST00000301981 BACH1O14867 736 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 DPH6Q7L8W6 267 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 PHLDB2Q86SQ0 1253 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 IFIH1Q9BYX4 1025 aaKnown RBP8.61□□□□□ -1.03
LRRC28-201ENST00000301981 ZNF185O15231 689 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 FGFR1OPO95684 399 aaKnown RBP8.61□□□□□ -1.03
LRRC28-201ENST00000301981 CYP2D6P10635 497 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 MAGEA1P43355 309 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 CUL4BQ13620 913 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 CAPN12Q6ZSI9 719 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 VSTM4Q8IW00 320 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 BCS1LQ9Y276 419 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 SPHKAPQ2M3C7 1700 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 ESYT3A0FGR9 886 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 RNF40O75150 1001 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 FTCDO95954 541 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 CTSWP56202 376 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 SNAP25P60880 206 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 IQCB1Q15051 598 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 BCAS4Q8TDM0 211 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 ZNF652Q9Y2D9 606 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 MED14O60244 1454 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 CPS1P31327 1500 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 NCK2O43639 380 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 MCM3P25205 808 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 PLCD1P51178 756 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 LRRC47Q8N1G4 583 aaKnown RBP8.61□□□□□ -1.03
LRRC28-201ENST00000301981 TMTC2Q8N394 836 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 LRWD1Q9UFC0 647 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 TMEM2Q9UHN6 1383 aa8.61□□□□□ -1.03
LRRC28-201ENST00000301981 VIMP08670 466 aaKnown RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 TCIRG1Q13488 830 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 FAM114A1Q8IWE2 563 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 TTF2Q9UNY4 1162 aaKnown RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 MROH7-TTC4A0A0A0MT08 1334 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 TSPOAP1O95153 1857 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 CALRP27797 417 aaKnown RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 CCDC121Q6ZUS5 278 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 CABP7Q86V35 215 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 AATKQ6ZMQ8 1374 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 A0A0U1RQJ8 604 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 ARID4AP29374 1257 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 INPP5BP32019 993 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 VPS41P49754 854 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 COPB1P53618 953 aaKnown RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 ARHGAP44Q17R89 818 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 NAA15Q9BXJ9 866 aaKnown RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 ZBTB1Q9Y2K1 713 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 EPN1Q9Y6I3 576 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 VAV2P52735 878 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 RBM6P78332 1123 aaKnown RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 SPAG1Q07617 926 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 KIAA0753Q2KHM9 967 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 ATL3Q6DD88 541 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 TBC1D31Q96DN5 1066 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 PACSIN2Q9UNF0 486 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 ZNF609O15014 1411 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 RPN1P04843 607 aaKnown RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 CDC25BP30305 580 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 EHHADHQ08426 723 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 PNMA8AQ86V59 439 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 ZSCAN10Q96SZ4 725 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 SETDB2Q96T68 719 aa8.6□□□□□ -1.03
LRRC28-201ENST00000301981 MRPL44Q9H9J2 332 aaKnown RBP8.6□□□□□ -1.03
LRRC28-201ENST00000301981 CEP152O94986 1710 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 CLGNO14967 610 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 RPSAP08865 295 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms