RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 MTMR4Q9NYA4 1195 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 MAD2L2Q9UI95 211 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 SCG2P13521 617 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 ME1P48163 572 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 STK38Q15208 465 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 SH3BP5LQ7L8J4 393 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 KCNG4Q8TDN1 519 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 CLIC4Q9Y696 253 aa12.13□□□□□ -0.47
COPS2-201ENST00000299259 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
COPS2-201ENST00000299259 BTBD18B2RXH4 712 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
COPS2-201ENST00000299259 PARP1P09874 1014 aaKnown RBP12.12□□□□□ -0.47
COPS2-201ENST00000299259 LIG1P18858 919 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 MRE11P49959 708 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 PFKFB3Q16875 520 aaPredicted RBP12.12□□□□□ -0.47
COPS2-201ENST00000299259 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 LRSAM1Q6UWE0 723 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 CLEC10AQ8IUN9 316 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 LINC00301Q8NCQ3 95 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 LZTS2Q9BRK4 669 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 PHF20Q9BVI0 1012 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 BRMS1Q9HCU9 246 aa12.12□□□□□ -0.47
COPS2-201ENST00000299259 CLRN2A0PK11 232 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 FAM196BA6NMK8 535 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 TTLL1O95922 423 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 KRT2P35908 639 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 LRRC47Q8N1G4 583 aaKnown RBP12.11□□□□□ -0.47
COPS2-201ENST00000299259 SBF1O95248 1867 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 SPTLC2O15270 562 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 LETM1O95202 739 aaPredicted RBP12.11□□□□□ -0.47
COPS2-201ENST00000299259 EIF6P56537 245 aaKnown RBP12.11□□□□□ -0.47
COPS2-201ENST00000299259 RASSF7Q02833 373 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 NR5A1Q13285 461 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 SF3A1Q15459 793 aaKnown RBP12.11□□□□□ -0.47
COPS2-201ENST00000299259 MTMR14Q8NCE2 650 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 NLGN2Q8NFZ4 835 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 SPZ1Q9BXG8 430 aa12.11□□□□□ -0.47
COPS2-201ENST00000299259 DDX19AQ9NUU7 478 aaKnown RBP12.11□□□□□ -0.47
COPS2-201ENST00000299259 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
COPS2-201ENST00000299259 TCP10L2B9ZVM9 353 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 GOLGA8HP0CJ92 632 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 SLURP2P0DP57 97 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 PDHBP11177 359 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 TNIP1Q15025 636 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
COPS2-201ENST00000299259 RILPL1Q5EBL4 403 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 FOXP4Q8IVH2 680 aaPredicted RBP12.1□□□□□ -0.47
COPS2-201ENST00000299259 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 NUP62CLQ9H1M0 184 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 CNTNAP1P78357 1384 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 MYO1BO43795 1136 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 TATDN1Q6P1N9 297 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 USP17L2Q6R6M4 530 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 CCDC73Q6ZRK6 1079 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 METTL16Q86W50 562 aaKnown RBP12.1□□□□□ -0.47
COPS2-201ENST00000299259 DACT1Q9NYF0 836 aa12.1□□□□□ -0.47
COPS2-201ENST00000299259 CYTH3O43739 400 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 RPS12P25398 132 aaKnown RBP12.09□□□□□ -0.47
COPS2-201ENST00000299259 SLC39A14Q15043 492 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 SLC35G1Q2M3R5 365 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 FKBP1CQ5VVH2 108 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
COPS2-201ENST00000299259 JMYQ8N9B5 988 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 GPKOWQ92917 476 aaPredicted RBP eCLIP12.09□□□□□ -0.478e-6■■□□□ 13.6
COPS2-201ENST00000299259 VEZTQ9HBM0 779 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 SH3GLB2Q9NR46 395 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 HERC5Q9UII4 1024 aaKnown RBP12.09□□□□□ -0.47
COPS2-201ENST00000299259 PCDHA7Q9UN72 937 aa12.09□□□□□ -0.47
COPS2-201ENST00000299259 A0A1W2PQ27 194 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 A0A1W2PQ64 194 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 A0A1W2PQD8 194 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 USP17L5A8MUK1 530 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 NR1I2O75469 434 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 SNHG28P0DPA3 235 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 CALML3P27482 149 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 MMP14P50281 582 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 NLRP5P59047 1200 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 ATP2B2Q01814 1243 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 PTPAQ15257 358 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 NPY5RQ15761 445 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 ADALQ6DHV7 355 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 FSIP1Q8NA03 581 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 CCDC148Q8NFR7 591 aa12.08□□□□□ -0.48
COPS2-201ENST00000299259 FAM151AQ8WW52 585 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms