RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
TGFA-201ENST00000295400 MRPS25P82663 173 aaKnown RBP13□□□□□ -0.33
TGFA-201ENST00000295400 CABP7Q86V35 215 aa13□□□□□ -0.33
TGFA-201ENST00000295400 MB21D2Q8IYB1 491 aaPredicted RBP13□□□□□ -0.33
TGFA-201ENST00000295400 DYNLL2Q96FJ2 89 aa13□□□□□ -0.33
TGFA-201ENST00000295400 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
TGFA-201ENST00000295400 SLC39A2Q9NP94 309 aa13□□□□□ -0.33
TGFA-201ENST00000295400 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
TGFA-201ENST00000295400 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
TGFA-201ENST00000295400 ZC3H13Q5T200 1668 aaKnown RBP13□□□□□ -0.33
TGFA-201ENST00000295400 BICDL2A1A5D9 508 aa13□□□□□ -0.33
TGFA-201ENST00000295400 PRR29P0C7W0 189 aa13□□□□□ -0.33
TGFA-201ENST00000295400 SCG2P13521 617 aa13□□□□□ -0.33
TGFA-201ENST00000295400 ST3GAL1Q11201 340 aa13□□□□□ -0.33
TGFA-201ENST00000295400 C2CD5Q86YS7 1000 aa13□□□□□ -0.33
TGFA-201ENST00000295400 BLIDQ8IZY5 108 aa13□□□□□ -0.33
TGFA-201ENST00000295400 SLC35F6Q8N357 371 aa13□□□□□ -0.33
TGFA-201ENST00000295400 SNX29Q8TEQ0 813 aa13□□□□□ -0.33
TGFA-201ENST00000295400 DIP2CQ9Y2E4 1556 aa13□□□□□ -0.33
TGFA-201ENST00000295400 SMCO2A6NFE2 343 aa13□□□□□ -0.33
TGFA-201ENST00000295400 PPP6R2O75170 966 aa13□□□□□ -0.33
TGFA-201ENST00000295400 IFNAR1P17181 557 aa13□□□□□ -0.33
TGFA-201ENST00000295400 CDC25BP30305 580 aa13□□□□□ -0.33
TGFA-201ENST00000295400 PLCD1P51178 756 aa13□□□□□ -0.33
TGFA-201ENST00000295400 SPATA1Q5VX52 437 aa13□□□□□ -0.33
TGFA-201ENST00000295400 CNBD1Q8NA66 436 aa13□□□□□ -0.33
TGFA-201ENST00000295400 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
TGFA-201ENST00000295400 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 TMEM110-MUSTN1A8MSY1 372 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 CHMP2AO43633 222 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 HSF2BPO75031 334 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 EXOSC10Q01780 885 aaKnown RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 IQCB1Q15051 598 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 NYXQ9GZU5 481 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 USP17L8P0C7I0 530 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 CYP2D6P10635 497 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 FDPSP14324 419 aaKnown RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 CLCN6P51797 869 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 DIXDC1Q155Q3 683 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 SHC4Q6S5L8 630 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 RRAGAQ7L523 313 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 MAEAQ7L5Y9 396 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 NAA15Q9BXJ9 866 aaKnown RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 KIF20AO95235 890 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 NONOQ15233 471 aaKnown RBP eCLIP12.99□□□□□ -0.33
TGFA-201ENST00000295400 ERFEQ4G0M1 354 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 LRRC47Q8N1G4 583 aaKnown RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 DYDC1Q8WWB3 177 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 ST5P78524 1137 aa12.99□□□□□ -0.33
TGFA-201ENST00000295400 GABPB1Q06547 395 aaPredicted RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 HERC4Q5GLZ8 1057 aaPredicted RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 ZCCHC17Q9NP64 241 aaKnown RBP12.99□□□□□ -0.33
TGFA-201ENST00000295400 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
TGFA-201ENST00000295400 KLRF2D3W0D1 207 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
TGFA-201ENST00000295400 ZYXQ15942 572 aaKnown RBP12.98□□□□□ -0.33
TGFA-201ENST00000295400 USP49Q70CQ1 688 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 ST7Q9NRC1 585 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
TGFA-201ENST00000295400 TLDC2A0PJX2 215 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 MAGEA1P43355 309 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 ARMCX5Q6P1M9 558 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 TOGARAM2Q6ZUX3 1019 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 OR8K1Q8NGG5 319 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 IKBKBO14920 756 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 RABL6Q3YEC7 729 aaPredicted RBP12.98□□□□□ -0.33
TGFA-201ENST00000295400 TRIM31Q9BZY9 425 aa12.98□□□□□ -0.33
TGFA-201ENST00000295400 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 VGLL3A8MV65 326 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 STX10O60499 249 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 RPN1P04843 607 aaKnown RBP12.97□□□□□ -0.33
TGFA-201ENST00000295400 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 NPHP4O75161 1426 aaPredicted RBP12.97□□□□□ -0.33
TGFA-201ENST00000295400 B4DLN1 442 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 TEX33O43247 280 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 USH1GQ495M9 461 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 IPO4Q8TEX9 1081 aaKnown RBP12.97□□□□□ -0.33
TGFA-201ENST00000295400 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
TGFA-201ENST00000295400 EYA3Q99504 573 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
TGFA-201ENST00000295400 PDE11AQ9HCR9 933 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 GDAQ9Y2T3 454 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 GSTTP1A0A1W2PQM5 241 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 USP17L3A6NCW0 530 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 USP17L4A6NCW7 530 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 BUB1O43683 1085 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 MTF1Q14872 753 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 SND1Q7KZF4 910 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms