RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CLIP2Q9UDT6 1046 aa31.78■■■□□ 2.68
SSU72-201ENST00000291386 CYP2C8P10632 490 aa31.77■■■□□ 2.68
SSU72-201ENST00000291386 C17orf99Q6UX52 265 aa31.77■■■□□ 2.68
SSU72-201ENST00000291386 NKX2-3Q8TAU0 364 aa31.77■■■□□ 2.68
SSU72-201ENST00000291386 ASCC2Q9H1I8 757 aaPredicted RBP31.77■■■□□ 2.68
SSU72-201ENST00000291386 GOPCQ9HD26 462 aa31.77■■■□□ 2.68
SSU72-201ENST00000291386 USP17L15C9J2P7 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 USP17L13C9JLJ4 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 USP17L11C9JVI0 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 USP17L18D6R9N7 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 USP17L22D6RA61 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 USP17L17D6RBQ6 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 USP17L19D6RCP7 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 USP17L20D6RJB6 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 USP17L24Q0WX57 530 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 KIAA1755Q5JYT7 1200 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 CATSPERGQ6ZRH7 1159 aa31.76■■■□□ 2.67
SSU72-201ENST00000291386 ZNF296Q8WUU4 475 aaPredicted RBP31.75■■■□□ 2.67
SSU72-201ENST00000291386 CASP8AP2Q9UKL3 1982 aa31.74■■■□□ 2.67
SSU72-201ENST00000291386 B4E1Z4 1266 aa31.74■■■□□ 2.67
SSU72-201ENST00000291386 NMT2O60551 498 aa31.74■■■□□ 2.67
SSU72-201ENST00000291386 KDM4AO75164 1064 aa31.74■■■□□ 2.67
SSU72-201ENST00000291386 GMCL1P1Q8NEA9 526 aa31.74■■■□□ 2.67
SSU72-201ENST00000291386 E7EWF7 191 aa31.73■■■□□ 2.67
SSU72-201ENST00000291386 SLC27A2O14975 620 aa31.73■■■□□ 2.67
SSU72-201ENST00000291386 WDR46O15213 610 aaKnown RBP31.73■■■□□ 2.67
SSU72-201ENST00000291386 EPB41L2O43491 1005 aaKnown RBP31.73■■■□□ 2.67
SSU72-201ENST00000291386 FKTNO75072 461 aa31.73■■■□□ 2.67
SSU72-201ENST00000291386 IRX3P78415 501 aaPredicted RBP31.73■■■□□ 2.67
SSU72-201ENST00000291386 CCDC178Q5BJE1 867 aa31.73■■■□□ 2.67
SSU72-201ENST00000291386 CREB3L3Q68CJ9 461 aa31.73■■■□□ 2.67
SSU72-201ENST00000291386 TTC14Q96N46 770 aa31.73■■■□□ 2.67
SSU72-201ENST00000291386 RPAP3Q9H6T3 665 aaPredicted RBP31.73■■■□□ 2.67
SSU72-201ENST00000291386 ZSWIM5Q9P217 1185 aa31.73■■■□□ 2.67
SSU72-201ENST00000291386 F5H6K3 240 aa31.72■■■□□ 2.67
SSU72-201ENST00000291386 REC8O95072 547 aa31.72■■■□□ 2.67
SSU72-201ENST00000291386 BCRP11274 1271 aa31.72■■■□□ 2.67
SSU72-201ENST00000291386 KLRC3Q07444 240 aa31.72■■■□□ 2.67
SSU72-201ENST00000291386 TRDNQ13061 729 aa31.72■■■□□ 2.67
SSU72-201ENST00000291386 SMCR8Q8TEV9 937 aaPredicted RBP31.72■■■□□ 2.67
SSU72-201ENST00000291386 STX8Q9UNK0 236 aa31.72■■■□□ 2.67
SSU72-201ENST00000291386 TAF6LQ9Y6J9 622 aa31.72■■■□□ 2.67
SSU72-201ENST00000291386 GCLCP48506 637 aaPredicted RBP31.71■■■□□ 2.67
SSU72-201ENST00000291386 SP3Q02447 781 aa31.71■■■□□ 2.67
SSU72-201ENST00000291386 STOX1Q6ZVD7 989 aa31.71■■■□□ 2.67
SSU72-201ENST00000291386 IQCA1Q86XH1 822 aa31.71■■■□□ 2.67
SSU72-201ENST00000291386 GTF3C2Q8WUA4 911 aaPredicted RBP31.71■■■□□ 2.67
SSU72-201ENST00000291386 P2RX7Q99572 595 aaKnown RBP31.71■■■□□ 2.67
SSU72-201ENST00000291386 RNF20Q5VTR2 975 aa31.7■■■□□ 2.67
SSU72-201ENST00000291386 DGKHQ86XP1 1220 aa31.7■■■□□ 2.67
SSU72-201ENST00000291386 SPICE1Q8N0Z3 855 aa31.7■■■□□ 2.67
SSU72-201ENST00000291386 NCOA7Q8NI08 942 aa31.7■■■□□ 2.67
SSU72-201ENST00000291386 CPA4Q9UI42 421 aa31.7■■■□□ 2.67
SSU72-201ENST00000291386 RLFQ13129 1914 aa31.7■■■□□ 2.67
SSU72-201ENST00000291386 NDUFB10O96000 172 aa31.69■■■□□ 2.66
SSU72-201ENST00000291386 HERVK_113P62684 666 aa31.69■■■□□ 2.66
SSU72-201ENST00000291386 RCSD1Q6JBY9 416 aa31.69■■■□□ 2.66
SSU72-201ENST00000291386 LBX2Q6XYB7 198 aa31.69■■■□□ 2.66
SSU72-201ENST00000291386 LRRC47Q8N1G4 583 aaKnown RBP31.69■■■□□ 2.66
SSU72-201ENST00000291386 ANKS1AQ92625 1134 aa31.69■■■□□ 2.66
SSU72-201ENST00000291386 GTF3C3Q9Y5Q9 886 aa31.69■■■□□ 2.66
SSU72-201ENST00000291386 PARP14Q460N5 1801 aa31.69■■■□□ 2.66
SSU72-201ENST00000291386 TOP1P11387 765 aaKnown RBP31.68■■■□□ 2.66
SSU72-201ENST00000291386 TSGA10IPQ3SY00 556 aa31.68■■■□□ 2.66
SSU72-201ENST00000291386 ZSCAN10Q96SZ4 725 aaPredicted RBP31.68■■■□□ 2.66
SSU72-201ENST00000291386 COG2Q14746 738 aa31.67■■■□□ 2.66
SSU72-201ENST00000291386 FAM110CQ1W6H9 321 aa31.67■■■□□ 2.66
SSU72-201ENST00000291386 RALYLQ86SE5 291 aaKnown RBP31.67■■■□□ 2.66
SSU72-201ENST00000291386 ERO1AQ96HE7 468 aa31.67■■■□□ 2.66
SSU72-201ENST00000291386 TMEM47Q9BQJ4 181 aa31.67■■■□□ 2.66
SSU72-201ENST00000291386 MYPNQ86TC9 1320 aa31.67■■■□□ 2.66
SSU72-201ENST00000291386 KCNB2Q92953 911 aa31.66■■■□□ 2.66
SSU72-201ENST00000291386 ZKSCAN3Q9BRR0 538 aa31.66■■■□□ 2.66
SSU72-201ENST00000291386 TANGO6Q9C0B7 1094 aa31.66■■■□□ 2.66
SSU72-201ENST00000291386 HOXC10Q9NYD6 342 aa31.66■■■□□ 2.66
SSU72-201ENST00000291386 MORF4L1Q9UBU8 362 aa31.66■■■□□ 2.66
SSU72-201ENST00000291386 HSPA4P34932 840 aa31.65■■■□□ 2.66
SSU72-201ENST00000291386 SLFN13Q68D06 897 aa31.65■■■□□ 2.66
SSU72-201ENST00000291386 CYB5R4Q7L1T6 521 aa31.65■■■□□ 2.66
SSU72-201ENST00000291386 MB21D2Q8IYB1 491 aaPredicted RBP31.65■■■□□ 2.66
SSU72-201ENST00000291386 GMCL1Q96IK5 515 aa31.65■■■□□ 2.66
SSU72-201ENST00000291386 SPDYE16A6NNV3 312 aaPredicted RBP31.64■■■□□ 2.66
SSU72-201ENST00000291386 RAD21O60216 631 aa31.64■■■□□ 2.66
SSU72-201ENST00000291386 DSG3P32926 999 aa31.64■■■□□ 2.66
SSU72-201ENST00000291386 FAM83BQ5T0W9 1011 aa31.64■■■□□ 2.66
SSU72-201ENST00000291386 ANKRD13CQ8N6S4 541 aa31.64■■■□□ 2.66
SSU72-201ENST00000291386 TNKSO95271 1327 aa31.64■■■□□ 2.66
SSU72-201ENST00000291386 LACTBP83111 547 aaPredicted RBP31.63■■■□□ 2.65
SSU72-201ENST00000291386 POTEEQ6S8J3 1075 aa31.63■■■□□ 2.65
SSU72-201ENST00000291386 ENAHQ8N8S7 591 aaPredicted RBP31.63■■■□□ 2.65
SSU72-201ENST00000291386 UBAC1Q9BSL1 405 aa31.63■■■□□ 2.65
SSU72-201ENST00000291386 MTA3Q9BTC8 594 aa31.63■■■□□ 2.65
SSU72-201ENST00000291386 RBPJLQ9UBG7 517 aa31.63■■■□□ 2.65
SSU72-201ENST00000291386 A0A0G2JMZ2 1700 aa31.62■■■□□ 2.65
SSU72-201ENST00000291386 FLOT1O75955 427 aa31.62■■■□□ 2.65
SSU72-201ENST00000291386 ZKSCAN1P17029 563 aaPredicted RBP31.62■■■□□ 2.65
SSU72-201ENST00000291386 SEC23AQ15436 765 aa31.62■■■□□ 2.65
SSU72-201ENST00000291386 RABGAP1Q9Y3P9 1069 aa31.62■■■□□ 2.65
SSU72-201ENST00000291386 EIF5BO60841 1220 aaKnown RBP31.61■■■□□ 2.65
SSU72-201ENST00000291386 BMP3P12645 472 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms