RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 CHAMP1Q96JM3 812 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 TMEM47Q9BQJ4 181 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 COL2A1P02458 1487 aaPredicted RBP13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 SCN4AP35499 1836 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 IGKV6D-41A0A0C4DH26 115 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 hCG_1642624A0A1W2PR95 340 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 STX6O43752 255 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 TNNI2P48788 182 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 TNFAIP1Q13829 316 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 FOXP4Q8IVH2 680 aaPredicted RBP13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 ZNF654Q8IZM8 581 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 GTF3C6Q969F1 213 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 MTMR4Q9NYA4 1195 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 A0A1W2PRG0 241 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 GOLGA8HP0CJ92 632 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 ECE1P42892 770 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 FOSBP53539 338 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 EVCP57679 992 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 USP50Q70EL3 339 aaPredicted RBP13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 APOBEC3FQ8IUX4 373 aaKnown RBP13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 FBXL16Q8N461 479 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 CLIP2Q9UDT6 1046 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 SWAP70Q9UH65 585 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 WDR19Q8NEZ3 1342 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 CCDC69A6NI79 296 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 PCP11498 1178 aaKnown RBP13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 LIFRP42702 1097 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 TROAPQ12815 778 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 ABCB5Q2M3G0 1257 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 GLIPR1L2Q4G1C9 344 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 KIAA1755Q5JYT7 1200 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 FOXD4L5Q5VV16 416 aaPredicted RBP13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 STAG2Q8N3U4 1231 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 FOXD4L4Q8WXT5 416 aaPredicted RBP13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 PHKBQ93100 1093 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 GJB4Q9NTQ9 266 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 SMC3Q9UQE7 1217 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
CHRNB3-201ENST00000289957 CEP350Q5VT06 3117 aa13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 CENPFP49454 3210 aa13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 ERICH2A1L162 156 aa13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 PFKFB2O60825 505 aa13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 GADD45BO75293 160 aaPredicted RBP13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 PLEKHA8P1O95397 391 aa13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 EEF2P13639 858 aaKnown RBP13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 ANKRD1Q15327 319 aa13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 SLC35G1Q2M3R5 365 aa13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 SULF1Q8IWU6 871 aa13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
CHRNB3-201ENST00000289957 ZBTB43O43298 467 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 RAD21O60216 631 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 SYT1P21579 422 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 MMP14P50281 582 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 MAP3K10Q02779 954 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 ZYXQ15942 572 aaKnown RBP13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 PNMA1Q8ND90 353 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 PIBF1Q8WXW3 757 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 AIFM3Q96NN9 605 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 MYH4Q9Y623 1939 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 GOLGA8AA7E2F4 631 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 VEGFAP15692 232 aaPredicted RBP13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 USP17L2Q6R6M4 530 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 NSUN7Q8NE18 718 aaKnown RBP13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 WRNIP1Q96S55 665 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 ZNF408Q9H9D4 720 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 ZBTB21Q9ULJ3 1066 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 PLIN4Q96Q06 1357 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 ATAD5Q96QE3 1844 aa13.3□□□□□ -0.28
CHRNB3-201ENST00000289957 USP17L5A8MUK1 530 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 CAP2P40123 477 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 SPICE1Q8N0Z3 855 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 CDCA5Q96FF9 252 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 MAP7D2Q96T17 732 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 NUP88Q99567 741 aaPredicted RBP13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 FUCA2Q9BTY2 467 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 ZNF287Q9HBT7 754 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 TCP11L1Q9NUJ3 509 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 MTMR6Q9Y217 621 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 FRMPD2Q68DX3 1309 aaPredicted RBP13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 PITPNM2Q9BZ72 1349 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 FDPSP14324 419 aaKnown RBP13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 GJB2P29033 226 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 ICA1Q05084 483 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 CLMNQ96JQ2 1002 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 KAT14Q9H8E8 782 aa13.29□□□□□ -0.28
CHRNB3-201ENST00000289957 ELP1O95163 1332 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms