RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 N4BP2L2Q92802 583 aaPredicted RBP8.6□□□□□ -1.03
TRIM6-201ENST00000278302 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 EPB41L4AQ9HCS5 686 aaPredicted RBP8.6□□□□□ -1.03
TRIM6-201ENST00000278302 IQSEC3Q9UPP2 1182 aaPredicted RBP8.6□□□□□ -1.03
TRIM6-201ENST00000278302 LRP6O75581 1613 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 SOWAHDA6NJG2 315 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 GSG1L2A8MUP6 293 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 PPP6R2O75170 966 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 USP8P40818 1118 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 LIFRP42702 1097 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 SGMS1Q86VZ5 419 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 KIRREL3Q8IZU9 778 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 LCORLQ8N3X6 602 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 MSANTD4Q8NCY6 345 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 BCAS4Q8TDM0 211 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 INTS13Q9NVM9 706 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 GNL3LQ9NVN8 582 aaKnown RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 ABCF2Q9UG63 623 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 MYH3P11055 1940 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 MINDY4BA8MYZ0 360 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 RANBP6O60518 1105 aaKnown RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 ZMYND10O75800 440 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 GNAT2P19087 354 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 AKAP17AQ02040 695 aaKnown RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 DDB1Q16531 1140 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 PARP10Q53GL7 1025 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 ZNF569Q5MCW4 686 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 NUP133Q8WUM0 1156 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 CDC23Q9UJX2 597 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 NUP98P52948 1817 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 UBE2Q2LH0YL09 131 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 PRPF6O94906 941 aaKnown RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 ABL1P00519 1130 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 CYP7A1P22680 504 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 PDE6BP35913 854 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 SETQ01105 290 aaPredicted RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 NTRK3Q16288 839 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 RTN1Q16799 776 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 INTS5Q6P9B9 1019 aaKnown RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 GSPT2Q8IYD1 628 aaKnown RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 TC2NQ8N9U0 490 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 MIEF2Q96C03 454 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 BPIFA3Q9BQP9 254 aa8.59□□□□□ -1.03
TRIM6-201ENST00000278302 FAM217BQ9NTX9 383 aaPredicted RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.03
TRIM6-201ENST00000278302 ADAMTS2O95450 1211 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 FMNL1O95466 1100 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 ELF1P32519 619 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CHRNDQ07001 517 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 SHC4Q6S5L8 630 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 OLFM4Q6UX06 510 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CTCFLQ8NI51 663 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 FAXDC2Q96IV6 333 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 ACBD3Q9H3P7 528 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 POLD4Q9HCU8 107 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 MROH7-TTC4A0A0A0MT08 1334 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 DISP2A7MBM2 1401 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 ANKRD36CQ5JPF3 1778 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 GOLGA6L9A6NEM1 432 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 BTBD18B2RXH4 712 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 PPP1R12AO14974 1030 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 IRAK1P51617 712 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 PNOCQ13519 176 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 PTPAQ15257 358 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 NCAPH2Q6IBW4 605 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CMTR1Q8N1G2 835 aaKnown RBP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CEP112Q8N8E3 955 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CPLX3Q8WVH0 158 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CDC5LQ99459 802 aaKnown RBP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 UBAC1Q9BSL1 405 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 FAM107BQ9H098 131 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CENPHQ9H3R5 247 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 RNF41Q9H4P4 317 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 KCNJ14Q9UNX9 436 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 C4AP0C0L4 1744 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 C4BP0C0L5 1744 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 LOC102724428A0A0B4J2F2 783 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 IFNAR1P17181 557 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 GGCXP38435 758 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 SIK1P57059 783 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 ACTN3Q08043 901 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 SPECC1Q5M775 1068 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 TMTC2Q8N394 836 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 ZKSCAN4Q969J2 545 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CABS1Q96KC9 395 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 MAP3K14Q99558 947 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 TACC3Q9Y6A5 838 aa8.58□□□□□ -1.04
TRIM6-201ENST00000278302 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 STX10O60499 249 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 SKAP2O75563 359 aaPredicted RBP8.57□□□□□ -1.04
TRIM6-201ENST00000278302 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 GUCY1A2P33402 732 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 MYL5Q02045 173 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 RESP18Q5W5W9 173 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 NOSTRINQ8IVI9 506 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 DIS3L2Q8IYB7 885 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms