RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 VPS54Q9P1Q0 977 aa25.48■■□□□ 1.67
CCDC7-201ENST00000277657 NFKBIEO00221 500 aa25.47■■□□□ 1.67
CCDC7-201ENST00000277657 SCG2P13521 617 aa25.47■■□□□ 1.67
CCDC7-201ENST00000277657 PFKFB3Q16875 520 aaPredicted RBP25.47■■□□□ 1.67
CCDC7-201ENST00000277657 METTL16Q86W50 562 aaKnown RBP25.47■■□□□ 1.67
CCDC7-201ENST00000277657 BICD2Q8TD16 824 aa25.47■■□□□ 1.67
CCDC7-201ENST00000277657 CCDC17Q96LX7 622 aa25.47■■□□□ 1.67
CCDC7-201ENST00000277657 LZTS2Q9BRK4 669 aa25.47■■□□□ 1.67
CCDC7-201ENST00000277657 BAZ2BQ9UIF8 2168 aaKnown RBP25.47■■□□□ 1.67
CCDC7-201ENST00000277657 CXCL9Q07325 125 aa25.47■■□□□ 1.67
CCDC7-201ENST00000277657 STK38Q15208 465 aa25.47■■□□□ 1.67
CCDC7-201ENST00000277657 OGFOD1Q8N543 542 aa25.47■■□□□ 1.67
CCDC7-201ENST00000277657 ZBTB12Q9Y330 459 aaPredicted RBP25.47■■□□□ 1.67
CCDC7-201ENST00000277657 PSDA5PKW4 1024 aaPredicted RBP25.46■■□□□ 1.67
CCDC7-201ENST00000277657 ME1P48163 572 aa25.46■■□□□ 1.67
CCDC7-201ENST00000277657 SLC39A14Q15043 492 aa25.46■■□□□ 1.67
CCDC7-201ENST00000277657 SLC35G1Q2M3R5 365 aa25.46■■□□□ 1.67
CCDC7-201ENST00000277657 FOXP4Q8IVH2 680 aaPredicted RBP25.46■■□□□ 1.67
CCDC7-201ENST00000277657 PCDHA7Q9UN72 937 aa25.46■■□□□ 1.67
CCDC7-201ENST00000277657 SPTLC2O15270 562 aa25.45■■□□□ 1.67
CCDC7-201ENST00000277657 MTMR14Q8NCE2 650 aa25.45■■□□□ 1.67
CCDC7-201ENST00000277657 OXER1Q8TDS5 423 aa25.45■■□□□ 1.67
CCDC7-201ENST00000277657 DDX19AQ9NUU7 478 aaKnown RBP25.45■■□□□ 1.67
CCDC7-201ENST00000277657 DACT1Q9NYF0 836 aa25.45■■□□□ 1.67
CCDC7-201ENST00000277657 NR5A1Q13285 461 aa25.45■■□□□ 1.66
CCDC7-201ENST00000277657 ADALQ6DHV7 355 aa25.45■■□□□ 1.66
CCDC7-201ENST00000277657 LTBP3Q9NS15 1303 aa25.44■■□□□ 1.66
CCDC7-201ENST00000277657 A0A1W2PQ27 194 aa25.44■■□□□ 1.66
CCDC7-201ENST00000277657 A0A1W2PQ64 194 aa25.44■■□□□ 1.66
CCDC7-201ENST00000277657 A0A1W2PQD8 194 aa25.44■■□□□ 1.66
CCDC7-201ENST00000277657 NR1I2O75469 434 aa25.44■■□□□ 1.66
CCDC7-201ENST00000277657 DLGAP5Q15398 846 aa25.44■■□□□ 1.66
CCDC7-201ENST00000277657 SF3A1Q15459 793 aaKnown RBP25.44■■□□□ 1.66
CCDC7-201ENST00000277657 NPY5RQ15761 445 aa25.44■■□□□ 1.66
CCDC7-201ENST00000277657 TATDN1Q6P1N9 297 aa25.44■■□□□ 1.66
CCDC7-201ENST00000277657 ZSCAN29Q8IWY8 852 aaPredicted RBP25.44■■□□□ 1.66
CCDC7-201ENST00000277657 CYTH3O43739 400 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 TTLL1O95922 423 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 PARP1P09874 1014 aaKnown RBP25.43■■□□□ 1.66
CCDC7-201ENST00000277657 SLURP2P0DP57 97 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 SMARCA1P28370 1054 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 PTPAQ15257 358 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 CCAR1Q8IX12 1150 aaKnown RBP25.43■■□□□ 1.66
CCDC7-201ENST00000277657 JDP2Q8WYK2 163 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 SPZ1Q9BXG8 430 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 BCS1LQ9Y276 419 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 KLRF2D3W0D1 207 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 VEGFAP15692 232 aaPredicted RBP25.43■■□□□ 1.66
CCDC7-201ENST00000277657 KRT2P35908 639 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 TOB1P50616 345 aaPredicted RBP25.43■■□□□ 1.66
CCDC7-201ENST00000277657 RILPL1Q5EBL4 403 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 CIAPIN1Q6FI81 312 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 NUP62CLQ9H1M0 184 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 SH3GLB2Q9NR46 395 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 TMOD2Q9NZR1 351 aa25.43■■□□□ 1.66
CCDC7-201ENST00000277657 SNHG28P0DPA3 235 aa25.42■■□□□ 1.66
CCDC7-201ENST00000277657 PPP4R3BQ5MIZ7 849 aa25.42■■□□□ 1.66
CCDC7-201ENST00000277657 RASGRP2Q7LDG7 609 aa25.42■■□□□ 1.66
CCDC7-201ENST00000277657 GOLPH3LQ9H4A5 285 aa25.42■■□□□ 1.66
CCDC7-201ENST00000277657 ZNF70Q9UC06 446 aaPredicted RBP25.42■■□□□ 1.66
CCDC7-201ENST00000277657 PPP6R2O75170 966 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 PDHBP11177 359 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 SPDYE2Q495Y8 402 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 USP17L2Q6R6M4 530 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 TNFRSF25Q93038 417 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 RBSNQ9H1K0 784 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 TSPY26PQ9H489 355 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 CLSTN2Q9H4D0 955 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.41■■□□□ 1.66
CCDC7-201ENST00000277657 MTMR7Q9Y216 660 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 ARFGEF1Q9Y6D6 1849 aa25.41■■□□□ 1.66
CCDC7-201ENST00000277657 GOLGA8HP0CJ92 632 aa25.4■■□□□ 1.66
CCDC7-201ENST00000277657 ENGASEQ8NFI3 743 aa25.4■■□□□ 1.66
CCDC7-201ENST00000277657 ZBED3Q96IU2 234 aaPredicted RBP25.4■■□□□ 1.66
CCDC7-201ENST00000277657 BRMS1Q9HCU9 246 aa25.4■■□□□ 1.66
CCDC7-201ENST00000277657 CLIP2Q9UDT6 1046 aa25.4■■□□□ 1.66
CCDC7-201ENST00000277657 FAM196BA6NMK8 535 aa25.4■■□□□ 1.66
CCDC7-201ENST00000277657 USP17L5A8MUK1 530 aa25.4■■□□□ 1.66
CCDC7-201ENST00000277657 CERKLQ49MI3 558 aaPredicted RBP25.4■■□□□ 1.66
CCDC7-201ENST00000277657 AXDND1Q5T1B0 1012 aaPredicted RBP25.4■■□□□ 1.66
CCDC7-201ENST00000277657 FKBP1CQ5VVH2 108 aa25.4■■□□□ 1.66
CCDC7-201ENST00000277657 CLEC10AQ8IUN9 316 aa25.4■■□□□ 1.66
CCDC7-201ENST00000277657 MPHOSPH10O00566 681 aaKnown RBP25.39■■□□□ 1.66
CCDC7-201ENST00000277657 SNW1Q13573 536 aaKnown RBP25.39■■□□□ 1.66
CCDC7-201ENST00000277657 RBM43Q6ZSC3 357 aaKnown RBP25.39■■□□□ 1.66
CCDC7-201ENST00000277657 FAM177A1Q8N128 213 aaPredicted RBP25.39■■□□□ 1.66
CCDC7-201ENST00000277657 LRRC47Q8N1G4 583 aaKnown RBP25.39■■□□□ 1.66
CCDC7-201ENST00000277657 PIBF1Q8WXW3 757 aa25.39■■□□□ 1.66
CCDC7-201ENST00000277657 MRPS27Q92552 414 aaKnown RBP25.39■■□□□ 1.66
CCDC7-201ENST00000277657 FUCA2Q9BTY2 467 aa25.39■■□□□ 1.66
CCDC7-201ENST00000277657 TRIM34Q9BYJ4 488 aa25.39■■□□□ 1.66
CCDC7-201ENST00000277657 MMP14P50281 582 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 EIF6P56537 245 aaKnown RBP25.38■■□□□ 1.65
CCDC7-201ENST00000277657 FAM160A1Q05DH4 1040 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 TNIP1Q15025 636 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 CCDC73Q6ZRK6 1079 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 JMYQ8N9B5 988 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 FSIP1Q8NA03 581 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 FAM151AQ8WW52 585 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 MYH4Q9Y623 1939 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms